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rifcsphigho2_01_scaffold_22867_2

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_200

partial RP 35 / 55 MC: 5 BSCG 5 / 51 ASCG 28 / 38
Location: 172..849

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation protein SDO1 homolog n=4 Tax=Methanocaldococcus RepID=SDO1_METJA id=5103843 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 224.0
  • Bit_score: 164
  • Evalue 1.10e-37
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 221.0
  • Bit_score: 296
  • Evalue 3.50e-77
Shwachman-Bodian-diamond syndrome protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 227.0
  • Bit_score: 166
  • Evalue 1.10e-38

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Taxonomy

CG_Pacearch_02 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 678
ATGCCAAAAGTAGTTGCAAGAATAAAGTTAAAAGGCAAGCACTTTGAGACTCATGTTGATCTTGACGAGGCCCTCAAGATAAAGGCGGGCAAGGGAGATATTGTATCAGCCCTGCTTACCCCAAGTATATATTACGATATAAACAAAGGAACTCATGCTTCCAACGCAGATTTACTCGAAGCTTTTGGAACAGAGGATGCTTACGAGATTGCAAAGAAAATTATCGTCTCCGGAGAAGTACAGAAGACGCAGGAATTCAGGGATGCGGAAAAAGAAGCGCGTATAAAGCAAATCATTAATTTAATTATAAAAAACGCAGTTGACCAGCACGGCAGACCTTATACTGAAGAGAGAATTAGGAGGGCAGTAGATGAGATACATTTCAACTTTGATACTCGTTCTGCAGAACAGCAAATGACGGACTTAGTTAATAAACTAAAGGAAGTGATTCCAATTAAGATTGAGACTAAGCGCGTCGAGATAATTATTCCTGCCAGTTTTACAGGCCAAGTTTATGGGGTTCTTAAAGACTACAAGGAAAGCGAAGAATGGCTCTCTAACGGAGATTTAAAGACGGTGATAAACATACCGGCAGGAGTACAGATAGATTTTTATGACAAGCTTAATTCCATAACTCACGGCGCTGTACAGAGCAAAGACCTGCCTCAACAGGAATAG
PROTEIN sequence
Length: 226
MPKVVARIKLKGKHFETHVDLDEALKIKAGKGDIVSALLTPSIYYDINKGTHASNADLLEAFGTEDAYEIAKKIIVSGEVQKTQEFRDAEKEARIKQIINLIIKNAVDQHGRPYTEERIRRAVDEIHFNFDTRSAEQQMTDLVNKLKEVIPIKIETKRVEIIIPASFTGQVYGVLKDYKESEEWLSNGDLKTVINIPAGVQIDFYDKLNSITHGAVQSKDLPQQE*