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rifcsphigho2_01_scaffold_22867

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_22867_1
unknown

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comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

rifcsphigho2_01_scaffold_22867_2
CG_Pacearch_02, Pacearchaeota, Archaea

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172..849
DNA (678bp) protein (226aa)
Ribosome maturation protein SDO1 homolog n=4 Tax=Methanocaldococcus RepID=SDO1_METJA id=5103843 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_02
Shwachman-Bodian-diamond syndrome protein
rifcsphigho2_01_scaffold_22867_3
CG_Pacearch_02, Pacearchaeota, Archaea

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920..1645
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003632410
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=CG_Pacearch_02
putative exosome complex RNA-binding protein 1
rifcsphigho2_01_scaffold_22867_4
CG_Pacearch_02, Pacearchaeota, Archaea

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1647..2345
DNA (699bp) protein (233aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Exosome complex exonuclease 1; K11600 exosome complex component RRP41 Tax=CG_Pacearch_02
exosome complex exonuclease Rrp41
rifcsphigho2_01_scaffold_22867_5
CG_Pacearch_03, Pacearchaeota, Archaea

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2342..3154
DNA (813bp) protein (271aa)
ribosomal RNA-processing protein RRP42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=CG_Pacearch_03
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribosomal RNA-processing protein RRP42
rifcsphigho2_01_scaffold_22867_6
CG_Pacearch_02, Pacearchaeota, Archaea

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3166..3528
DNA (363bp) protein (121aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5045978 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_22867_7

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3575..5053
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378BA8A
Marine sediment metagenome DNA, contig: S12H4_C00020 {ECO:0000313|EMBL:GAI68128.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_22867_8
CG_Pacearch_02, Pacearchaeota, Archaea

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5188..6018
DNA (831bp) protein (277aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Pacearch_02
30S ribosomal protein S2
rifcsphigho2_01_scaffold_22867_9
unknown

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5991..6272
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_01_scaffold_22867_10
CG_Pacearch_06, Pacearchaeota, Archaea

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6371..6520
DNA (150bp) protein (50aa)
transposase Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_22867_11
unknown

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6571..6747
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsphigho2_01_scaffold_22867_12
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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6747..7019
DNA (273bp) protein (91aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_01_scaffold_22867_13
unknown

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7021..7632
DNA (612bp) protein (204aa)

This feature has no annotations

rifcsphigho2_01_scaffold_22867_14
unknown

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9385..9567
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 14 items

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