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BJP_Ig2102_PER_final

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Displaying items 1-30 of 886 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BJP_Ig2102_PER_final_1
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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22..984
DNA (963bp) protein (321aa)
serine/threonine protein kinase 3, CTR3 Tax=BJP_IG2102_PER_44_74
hypothetical protein id=5097696 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
serine/threonine protein kinase 3, CTR3
BJP_Ig2102_PER_final_2
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(955..1590)
DNA (636bp) protein (212aa)
hypothetical protein; K00358 [EC:1.6.99.-] Tax=BJP_IG2102_PER_44_74
Nitroreductase family protein n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0C4S9_9DELT
hypothetical protein
BJP_Ig2102_PER_final_3
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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1702..2034
DNA (333bp) protein (111aa)
putative HxlR family transcriptional regulator Tax=BJP_IG2102_PER_44_74
Putative uncharacterized protein id=3934418 bin=GWC2_TM7_48_9 species=Wolinella succinogenes genus=Wolinella taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
putative HxlR family transcriptional regulator
BJP_Ig2102_PER_final_4
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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2038..3042
DNA (1005bp) protein (335aa)
lysyl-tRNA synthetase-related protein GenX; K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=BJP_IG2102_PER_44_74
tRNA synthetase class II (D K and N); K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=5096226 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
lysyl-tRNA synthetase
BJP_Ig2102_PER_final_5
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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3044..3607
DNA (564bp) protein (188aa)
translation elongation factor P; K02356 elongation factor P Tax=BJP_IG2102_PER_44_74
efp; elongation factor P; K02356 elongation factor P id=5802121 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
translation elongation factor P
BJP_Ig2102_PER_final_6
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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3613..4881
DNA (1269bp) protein (423aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=BJP_IG2102_PER_44_74
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5090922 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
seryl-tRNA synthetase (EC:6.1.1.11)
BJP_Ig2102_PER_final_7
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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4893..5684
DNA (792bp) protein (264aa)
Xylose isomerase-like, TIM barrel domain Tax=BJP_IG2102_PER_44_74
Xylose isomerase-like, TIM barrel domain id=5098113 bin=PER_GWF2_43_18 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
BJP_Ig2102_PER_final_8
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

5684..6340
DNA (657bp) protein (219aa)
ABC transporter, ATP-binding protein n=6 Tax=Clostridium difficile RepID=D5Q2A9_CLODI
antimicrobial peptide ABC transporter ATPase Tax=BJP_IG2102_PER_44_74
antimicrobial peptide ABC transporter ATPase
BJP_Ig2102_PER_final_9
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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6342..7571
DNA (1230bp) protein (410aa)
ABC transporter permease Tax=BJP_IG2102_PER_44_74
ABC transporter permease; K02004 putative ABC transport system permease protein id=5090919 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ABC transporter permease
BJP_Ig2102_PER_final_10
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(7618..10092)
DNA (2475bp) protein (825aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003467469 rbh
hypothetical protein Tax=BJP_IG2102_PER_44_74
hypothetical protein
BJP_Ig2102_PER_final_11
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(10214..10528)
DNA (315bp) protein (105aa)
Tax=BJP_IG2102_PER_44_74
BJP_Ig2102_PER_final_12
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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10709..11380
DNA (672bp) protein (224aa)
Tax=BJP_IG2102_PER_44_74
BJP_Ig2102_PER_final_13
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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11500..15117
DNA (3618bp) protein (1206aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=BJP_IG2102_PER_44_74
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=5090918 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
BJP_Ig2102_PER_final_14
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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15154..15675
DNA (522bp) protein (174aa)
ssb; single-strand DNA-binding protein; K03111 single-strand DNA-binding protein Tax=BJP_IG2102_PER_44_74
single-strand-binding protein; K03111 single-strand DNA-binding protein id=5097525 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
hypothetical protein
BJP_Ig2102_PER_final_15
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

15712..19605
DNA (3894bp) protein (1298aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=BJP_IG2102_PER_44_74
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5090916 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
DNA-directed RNA polymerase subunit beta'
BJP_Ig2102_PER_final_16
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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19682..20104
DNA (423bp) protein (141aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=BJP_IG2102_PER_44_74
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5093303 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
rpsL; 30S ribosomal protein S12
BJP_Ig2102_PER_final_17
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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20116..20562
DNA (447bp) protein (149aa)
30S ribosomal protein S7 n=1 Tax=uncultured bacterium RepID=K1ZKN4_9BACT
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=BJP_IG2102_PER_44_74
30S ribosomal protein S7
BJP_Ig2102_PER_final_18
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

comp(20650..21546)
DNA (897bp) protein (299aa)
RNA polymerase sigma factor n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QFT1_DESAH
rpoH; protein RpoH; K03089 RNA polymerase sigma-32 factor Tax=BJP_IG2102_PER_44_74
rpoH; protein RpoH
BJP_Ig2102_PER_final_19
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

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comp(21513..21701)
DNA (189bp) protein (63aa)
Tax=BJP_IG2102_PER_44_74
BJP_Ig2102_PER_final_20
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

21728..23818
DNA (2091bp) protein (697aa)
fusA-3; translation elongation factor G; K02355 elongation factor G Tax=BJP_IG2102_PER_44_74
translation elongation factor G; K02355 elongation factor G id=5097531 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria) rbh
fusA-3; translation elongation factor G
BJP_Ig2102_PER_final_21
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

23998..25188
DNA (1191bp) protein (397aa)
Elongation factor Tu n=1 Tax=uncultured bacterium RepID=K2ANQ5_9BACT rbh
tufA; elongation factor Tu; K02358 elongation factor Tu Tax=BJP_IG2102_PER_44_74
tufA; elongation factor Tu
BJP_Ig2102_PER_final_22
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


25477..25797
DNA (321bp) protein (107aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2B3U3_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=BJP_IG2102_PER_44_74
rpsJ; 30S ribosomal protein S10
BJP_Ig2102_PER_final_23
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


26099..26686
DNA (588bp) protein (196aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802063 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
rplC; 50S ribosomal protein L3
BJP_Ig2102_PER_final_24
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


26692..27327
DNA (636bp) protein (212aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5802064 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
50S ribosomal protein L4
BJP_Ig2102_PER_final_25
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


27330..27638
DNA (309bp) protein (103aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 id=5094428 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rplW; 50S ribosomal protein L23
BJP_Ig2102_PER_final_26
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


27641..28474
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=uncultured bacterium RepID=K2D6K5_9BACT rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=BJP_IG2102_PER_44_74
rplB; 50S ribosomal protein L2
BJP_Ig2102_PER_final_27
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


28485..28757
DNA (273bp) protein (91aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=BJP_IG2102_PER_44_74
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5802067 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
30S ribosomal protein S19
BJP_Ig2102_PER_final_28
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


28767..29213
DNA (447bp) protein (149aa)
rplV; 50S ribosomal protein L22 Tax=BJP_IG2102_PER_44_74
ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=98625 bin=ACD65 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=ACD65 organism_group=PER (Peregrinibacteria) organism_desc=PER
rplV; ribosomal protein L22
BJP_Ig2102_PER_final_29
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


29226..29909
DNA (684bp) protein (228aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=BJP_IG2102_PER_44_74
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5096438 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
rpsC; 30S ribosomal protein S3
BJP_Ig2102_PER_final_30
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists


29920..30339
DNA (420bp) protein (140aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=BJP_IG2102_PER_44_74
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5093043 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L16
Displaying items 1-30 of 886 in total

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