ggKbase home page

rifcsphigho2_01_scaffold_7952

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_7952_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(40..804)
DNA (765bp) protein (255aa)
id=5044910 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_01_scaffold_7952_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(954..1760)
DNA (807bp) protein (269aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=AR11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L11P
rifcsphigho2_01_scaffold_7952_3

Not on your lists


comp(1964..2473)
DNA (510bp) protein (170aa)
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NusG antitermination factor id=5799592 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_01_scaffold_7952_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2563..2760)
DNA (198bp) protein (66aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=CG_Woesearch_02
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
secE; preprotein translocase subunit SecE
rifcsphigho2_01_scaffold_7952_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2980..4125)
DNA (1146bp) protein (382aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR11
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsphigho2_01_scaffold_7952_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4177..4842)
DNA (666bp) protein (222aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=CG_Woesearch_02
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_01_scaffold_7952_7

Not on your lists

comp(4866..5414)
DNA (549bp) protein (183aa)
(d)CMP kinase {ECO:0000256|SAAS:SAAS00054803}; EC=2.7.4.25 {ECO:0000256|SAAS:SAAS00054803};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=5046594 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cytidylate kinase (EC:2.7.4.14)
rifcsphigho2_01_scaffold_7952_8
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(5488..7113)
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT20_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO41449.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
rifcsphigho2_01_scaffold_7952_9
unknown

Not on your lists

7253..7426
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_10
unknown

Not on your lists

7398..7562
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7564..8427
DNA (864bp) protein (288aa)
Putative HTH-type transcriptional regulatory protein Metin_1036 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSZ1_METIM
XRE family transcriptional regulator; K07728 putative transcriptional regulator Tax=CG_Woesearch_02
XRE family transcriptional regulator
rifcsphigho2_01_scaffold_7952_12
GWB1_OD1_46_27, Azambacteria, Parcubacteria, Bacteria

Not on your lists

8480..9427
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDW3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKU32300.1}; TaxID=1618617 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_46_27.;"
rifcsphigho2_01_scaffold_7952_13
unknown

Not on your lists

comp(9419..9988)
DNA (570bp) protein (190aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_14
unknown

Not on your lists

10202..10507
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_15
unknown

Not on your lists

10521..10661
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_16
unknown

Not on your lists

10621..11253
DNA (633bp) protein (211aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

11303..11788
DNA (486bp) protein (162aa)
Tax=AR11
rifcsphigho2_01_scaffold_7952_18
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11783..11965)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS24571.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
rifcsphigho2_01_scaffold_7952_19
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11950..13557)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003689509
extensin-like Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
rifcsphigho2_01_scaffold_7952_20
unknown

Not on your lists

comp(13526..13828)
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_21
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13969..15657)
DNA (1689bp) protein (563aa)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKS24572.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Glutamate--tRNA ligase id=5800680 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamate-tRNA ligase
rifcsphigho2_01_scaffold_7952_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15821..16033
DNA (213bp) protein (71aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone Tax=CG_Woesearch_02
archaeal histone
rifcsphigho2_01_scaffold_7952_23
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

16414..17007
DNA (594bp) protein (198aa)
hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
Putative uncharacterized protein id=3406514 bin=GWC1_TM7_41_48 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_TM7_41_48 organism_group=TM7
HAD-superfamily hydrolase
rifcsphigho2_01_scaffold_7952_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

17009..17497
DNA (489bp) protein (163aa)
Phosphodiesterase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8H0_HALJB
phosphodiesterase; K07095 Tax=AR11
phosphodiesterase
rifcsphigho2_01_scaffold_7952_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

17499..17909
DNA (411bp) protein (137aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR11
Hit-like protein involved in cell-cycle regulation
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5240730 bin=GW2011_AR10_complete species=Ignicoccus hospitalis genus=Ignicoccus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_7952_26
unknown

Not on your lists

comp(17910..18707)
DNA (798bp) protein (266aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_27
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18973..19512
DNA (540bp) protein (180aa)
Thioredoxin-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALY1_IGNAJ
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:AFH49988.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteri
rifcsphigho2_01_scaffold_7952_28
unknown

Not on your lists

19667..20041
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsphigho2_01_scaffold_7952_29

Not on your lists

comp(20030..21025)
DNA (996bp) protein (332aa)
glycosyl transferase family protein id=5048704 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glycosyl transferase family protein {ECO:0000313|EMBL:KHO45367.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
WcaA; cell wall biosynthesis glycosyltransferase
rifcsphigho2_01_scaffold_7952_30
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21267..21620)
DNA (354bp) protein (118aa)
hypothetical protein Tax=AR11
Displaying 30 items

View Taxonomy