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rifcsphigho2_01_scaffold_10810

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_10810_1
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2..442)
DNA (441bp) protein (147aa)
glycoside hydrolase 15-like protein; K07190 phosphorylase kinase alpha/beta subunit Tax=CG_Woesearch_01
glycoside hydrolase 15-like protein; K07190 phosphorylase kinase alpha/beta subunit id=5044577 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glycoside hydrolase 15-like protein
rifcsphigho2_01_scaffold_10810_2
unknown

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comp(465..1337)
DNA (873bp) protein (291aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10810_3
unknown

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comp(1341..1961)
DNA (621bp) protein (207aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10810_4
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2103..2345
DNA (243bp) protein (81aa)
hypothetical protein Tax=BJP_IG2102_Methanoregula_52_95
rifcsphigho2_01_scaffold_10810_5
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2323..2763
DNA (441bp) protein (147aa)
PilT protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0N1V8_9EURY
twitching motility protein PilT
twitching motility protein PilT Tax=BJP_IG2102_Methanoregula_52_95
rifcsphigho2_01_scaffold_10810_6
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2753..3460)
DNA (708bp) protein (236aa)
Ala-tRNA(Pro) hydrolase (EC:3.1.1.-)
UPI0003D1B02C related cluster n=1 Tax=unknown RepID=UPI0003D1B02C
Alanyl-tRNA editing protein AlaX {ECO:0000313|EMBL:KGK97837.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanoc
rifcsphigho2_01_scaffold_10810_7

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comp(3529..3876)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97907.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsphigho2_01_scaffold_10810_8
AR11, Woesearchaeaota, DPANN, Archaea

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4214..4576
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ id=5103294 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=AR11
rifcsphigho2_01_scaffold_10810_9
AR11, Woesearchaeaota, DPANN, Archaea

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4638..5402
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
phosphoesterase; K06953 Tax=AR11
hypothetical protein
rifcsphigho2_01_scaffold_10810_10

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comp(5408..5953)
DNA (546bp) protein (182aa)
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KHO53501.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5049192 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative transcription regulator, containing CBS protein
rifcsphigho2_01_scaffold_10810_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

6401..7597
DNA (1197bp) protein (399aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=CG_Woesearch_01
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5049197 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S-adenosylmethionine synthetase (EC:2.5.1.6)
rifcsphigho2_01_scaffold_10810_12
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7611..8654)
DNA (1044bp) protein (348aa)
agmatine deiminase (EC:3.5.3.12) Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXG8_METBM
rifcsphigho2_01_scaffold_10810_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(8664..9536)
DNA (873bp) protein (291aa)
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
peptidyl-arginine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] id=5094013 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
N-carbamoylputrescine amidase (EC:3.5.1.53)
rifcsphigho2_01_scaffold_10810_14
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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comp(9678..10079)
DNA (402bp) protein (134aa)
S-adenosylmethionine decarboxylase-like protein; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=RBG_16_RIF03_38_11_curated
S-adenosylmethionine decarboxylase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B75DFF
S-adenosylmethionine decarboxylase proenzyme
rifcsphigho2_01_scaffold_10810_15

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comp(10437..11054)
DNA (618bp) protein (206aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH id=5103755 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved hypothetical membrane protein, peptidase family M50 {ECO:0000313|EMBL:KHO52812.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Conserved hypothetical membrane protein, peptidase family M50
rifcsphigho2_01_scaffold_10810_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(11063..11629)
DNA (567bp) protein (189aa)
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
rifcsphigho2_01_scaffold_10810_17
GWD2_Desulfuromonadales_54_10, GWD2_Desulfuromonadales_54_10, GWD2_Desulfuromonadales_54_10, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11645..12529)
DNA (885bp) protein (295aa)
id=1835647 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
id=1835647 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rifcsphigho2_01_scaffold_10810_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12596..12943)
DNA (348bp) protein (116aa)
hypothetical protein
RNA polymerase II, Rpb4 Tax=CG_Woesearch_02
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_10810_19
AR18, Woesearchaeaota, DPANN, Archaea

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comp(12949..13239)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5051516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=AR18
50S ribosomal protein L21e
rifcsphigho2_01_scaffold_10810_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13532..13756
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
hypothetical protein
Putative uncharacterized protein Tax=AR11
Displaying 20 items

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