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rifcsphigho2_01_scaffold_4894

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4894_1
unknown

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80..232
DNA (153bp) protein (51aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4894_2
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(237..437)
DNA (201bp) protein (67aa)
seg Tax=AR19
rifcsphigho2_01_scaffold_4894_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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600..914
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ71_METH6
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsphigho2_01_scaffold_4894_4
unknown

Not on your lists

915..1370
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4894_5

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1410..2609
DNA (1200bp) protein (400aa)
Exodeoxyribonuclease VII large subunit {ECO:0000313|EMBL:KHO49913.1}; EC=3.1.11.6 {ECO:0000313|EMBL:KHO49913.1};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
Exodeoxyribonuclease VII, large subunit n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB75_METEZ
exodeoxyribonuclease VII large subunit
rifcsphigho2_01_scaffold_4894_6

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2593..2805
DNA (213bp) protein (71aa)
Exodeoxyribonuclease VII small subunit {ECO:0000313|EMBL:KHO49914.1}; EC=3.1.11.6 {ECO:0000313|EMBL:KHO49914.1};; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UMY5_9STAP
Exodeoxyribonuclease VII small subunit
rifcsphigho2_01_scaffold_4894_7

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comp(2798..3442)
DNA (645bp) protein (215aa)
Triosephosphate isomerase TIM {ECO:0000313|EMBL:KHO50981.1}; EC=5.3.1.1 {ECO:0000313|EMBL:KHO50981.1};; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Triosephosphate isomerase n=13 Tax=Thermococcaceae RepID=TPIS_PYRHO id=5086878 bin=GWF1_OP11_31_35_complete species=unknown genus=unknown taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
triosephosphate isomerase
rifcsphigho2_01_scaffold_4894_8
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(3439..4437)
DNA (999bp) protein (333aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
Uncharacterized protein id=5800423 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsphigho2_01_scaffold_4894_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(4434..5258)
DNA (825bp) protein (275aa)
fbaB-1; fructose-bisphosphate aldolase (class I) (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=CG_Pacearch_05
fbaB-1; fructose-bisphosphate aldolase (class I) (EC:4.1.2.13)
Fructose-bisphosphate aldolase 1 n=1 Tax=uncultured bacterium RepID=K2C1V8_9BACT
rifcsphigho2_01_scaffold_4894_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5248..6186)
DNA (939bp) protein (313aa)
Carbohydrate kinase n=1 Tax=sediment metagenome RepID=D9PEX2_9ZZZZ
ribokinase family sugar kinase Tax=RBG_13_Pacearchaeota_36_9_curated
ribokinase family sugar kinase
rifcsphigho2_01_scaffold_4894_11

Not on your lists

comp(6229..7371)
DNA (1143bp) protein (381aa)
Phosphoglycerate kinase {ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|RuleBase:RU000532};; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64C80_9ARCH
rifcsphigho2_01_scaffold_4894_12
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(7368..7670)
DNA (303bp) protein (101aa)
transmembrane_regions id=5095851 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
transmembrane_regions Tax=PER_GWF2_38_29
rifcsphigho2_01_scaffold_4894_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7770..8516
DNA (747bp) protein (249aa)
phosphate/sulfate permease Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_4894_14
unknown

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8513..13621
DNA (5109bp) protein (1703aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4894_15
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13490..14209)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003615558
btpA family protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsphigho2_01_scaffold_4894_16

Not on your lists

comp(14386..14730)
DNA (345bp) protein (115aa)
hypothetical protein
transmembrane_regions id=5241306 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60297.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_4894_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14784..15242
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Thermococcus sp. AM4 RepID=B7R1H3_9EURY
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_4894_18

Not on your lists

15265..16155
DNA (891bp) protein (297aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74N19_NANEQ
Marine sediment metagenome DNA, contig: S01H1_L05219 {ECO:0000313|EMBL:GAF77446.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_4894_19
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(16170..16598)
DNA (429bp) protein (143aa)
Heat shock protein Hsp20 n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CGL2_KOSOT
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACR79594.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
rifcsphigho2_01_scaffold_4894_20
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(16655..19093)
DNA (2439bp) protein (813aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037925B2
cdcH; cell division protein 48; K13525 transitional endoplasmic reticulum ATPase Tax=CG_Pacearch_01
AAA family ATPase, CDC48 subfamily
rifcsphigho2_01_scaffold_4894_21
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19095..19478)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376420B
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsphigho2_01_scaffold_4894_22
unknown

Not on your lists

19805..20191
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4894_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

20216..20881
DNA (666bp) protein (222aa)
hypothetical protein
id=5103328 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_4894_24
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

20982..21290
DNA (309bp) protein (103aa)
DNA-directed RNA polymerase subunit M n=2 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RPOM_METTH
transcription termination factor Tfs; K03057 transcription elongation factor Tax=CG_Pacearch_05
transcription elongation factor TFIIS
Displaying 24 items

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