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rifcsphigho2_01_scaffold_24016

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_24016_1
CG_Pacearch_03, Pacearchaeota, Archaea

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1..504
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
transposase Tax=CG_Pacearch_03
Mobile element protein
rifcsphigho2_01_scaffold_24016_2
unknown

Not on your lists

comp(501..845)
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24016_3
unknown

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854..1072
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24016_4
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists


1128..1325
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_01
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
rifcsphigho2_01_scaffold_24016_5
unknown

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1627..1989
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24016_6

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comp(2033..2335)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK69766.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_01_scaffold_24016_7
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(2725..3306)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000366B2E8
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_01_scaffold_24016_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(3333..3629)
DNA (297bp) protein (99aa)
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_24016_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3651..4364
DNA (714bp) protein (238aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUY6_9BACT id=5103795 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC-type transporters, involved in lipoprotein release, ATPase component; K02003 putative ABC transport system ATP-binding protein Tax=RBG_13_Pacearchaeota_36_9_curated
ABC transport system protein
rifcsphigho2_01_scaffold_24016_10

Not on your lists

4366..5580
DNA (1215bp) protein (405aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49496.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein; K02004 putative ABC transport system permease protein id=5046029 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_24016_11
unknown

Not on your lists

5672..5998
DNA (327bp) protein (109aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24016_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5995..6876
DNA (882bp) protein (294aa)
id=5103794 Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
id=5103794 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_24016_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6937..7104
DNA (168bp) protein (56aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_24016_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


7209..7466
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=RBG_13_Pacearchaeota_36_9_curated
Ribosomal protein L21e
rifcsphigho2_01_scaffold_24016_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7463..7774
DNA (312bp) protein (104aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_24016_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7783..8325
DNA (543bp) protein (181aa)
hypothetical protein; K07572 putative nucleotide binding protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
rifcsphigho2_01_scaffold_24016_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


8365..8862
DNA (498bp) protein (166aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps13p; 30S ribosomal protein S13P; K02952 small subunit ribosomal protein S13 Tax=RBG_13_Pacearchaeota_36_9_curated
30S ribosomal protein S13
rifcsphigho2_01_scaffold_24016_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


8859..9377
DNA (519bp) protein (173aa)
30S ribosomal protein S4 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ID29_ACIB4
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_13_Pacearchaeota_36_9_curated
30S ribosomal protein S4
rifcsphigho2_01_scaffold_24016_19

Not on your lists


9367..9822
DNA (456bp) protein (152aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RS11_THESM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rps11p; 30S ribosomal protein S11
rifcsphigho2_01_scaffold_24016_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10127..10783
DNA (657bp) protein (219aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
Displaying 20 items

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