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rifcsphigho2_01_scaffold_28057_9

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_33_47

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 29 / 38 MC: 1
Location: 4105..4845

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5045975 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 217.0
  • Bit_score: 186
  • Evalue 3.10e-44
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 236.0
  • Bit_score: 262
  • Evalue 8.10e-67
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 221.0
  • Bit_score: 176
  • Evalue 6.90e-42

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Taxonomy

CG_Pacearch_05 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 741
ATGTACAGGAATAGAGAAGATATGGAAATGGAAGAAGAAGTGGTTTCTGAAAATGAGCAATATGAAAATGTTGAGGCTGAAGCTGATGTCGAGAGAAAATTAGTTATTCCTGGAGAAGTTATTGTTTCAGGAGATTATTTGCCTGGAGATTTTACGAGAAAAGAAGGTAATGATGTTATTTCTAATAGATATGGTTTGGCAGAAATTAATGGCCGAGTTGTTAGAATAATTCCTATTTCTGGAGTTTATGAGCCTCGACGTGGAAATTCAGTTATTGGTCGAGTTGAAGATGTAACTTTTAGCGGTTGGATAATTGATGTTGGCGGACCATACTCTTCGTTTTTATCATTGTCTGAATGCCCGCGCTTTATCAATAAATCTAATATTGAAGATTTTGCTATAGTCGGAGATATTATGAGTGCAAAAATTAATAATGTAAAGAAAGGTGGAATTGATTTAACCATCCGAATTCGAGGTTTAGGTAAATTAGATGGTGGAAGAGTTATTAGAATTAATCCTCATAAAGTTCCGCGAGTTATTGGAAGAGGCGGAAGTATGATTAATATGATTAAGATGAAAACTGATACCGAGATTAATGTTGGACAAAATGGATTTATTTGGCTTAAGGGTTCTTCTGAAGGAGAACGAAAATCTGAAGAAGCTATTAACATGATTGTTGAAAATTCTGCGACTGAAGGTTTGACTGATAGAATTGAAAAATTCCTTGGAGGTAATCAATGA
PROTEIN sequence
Length: 247
MYRNREDMEMEEEVVSENEQYENVEAEADVERKLVIPGEVIVSGDYLPGDFTRKEGNDVISNRYGLAEINGRVVRIIPISGVYEPRRGNSVIGRVEDVTFSGWIIDVGGPYSSFLSLSECPRFINKSNIEDFAIVGDIMSAKINNVKKGGIDLTIRIRGLGKLDGGRVIRINPHKVPRVIGRGGSMINMIKMKTDTEINVGQNGFIWLKGSSEGERKSEEAINMIVENSATEGLTDRIEKFLGGNQ*