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rifcsphigho2_01_scaffold_28057

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_28057_1
unknown

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1..735
DNA (735bp) protein (245aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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701..976
DNA (276bp) protein (92aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsphigho2_01_scaffold_28057_3
CG_Pacearch_05, Pacearchaeota, Archaea

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1422..2126
DNA (705bp) protein (235aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_05
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha
rifcsphigho2_01_scaffold_28057_4
CG_Pacearch_05, Pacearchaeota, Archaea

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2217..2885
DNA (669bp) protein (223aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_05
RNA-associated protein
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_28057_5
unknown

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2932..3441
DNA (510bp) protein (170aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_6
unknown

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3438..3539
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_7
unknown

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3502..3762
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_8
Mucispirillum schaedleri, Mucispirillum, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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3756..4118
DNA (363bp) protein (121aa)
Carbon storage regulator homolog n=1 Tax=Mucispirillum schaedleri ASF457 RepID=V2QDA5_9BACT
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1379858 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Mucispirillu
carbon storage regulator CsrA
rifcsphigho2_01_scaffold_28057_9
CG_Pacearch_05, Pacearchaeota, Archaea

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4105..4845
DNA (741bp) protein (247aa)
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5045975 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_05
exosome complex RNA-binding protein Rrp4
rifcsphigho2_01_scaffold_28057_10
unknown

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4842..4964
DNA (123bp) protein (41aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_11
unknown

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4966..5319
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_12
unknown

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5276..5662
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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5665..6375
DNA (711bp) protein (237aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_13_Pacearchaeota_36_9_curated
exosome complex exonuclease Rrp41
rifcsphigho2_01_scaffold_28057_14
unknown

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6362..6649
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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6651..7472
DNA (822bp) protein (274aa)
rrp42; exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_13_Pacearchaeota_36_9_curated
Ribosomal RNA-processing protein RRP42 id=5800801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal RNA-processing protein RRP42
rifcsphigho2_01_scaffold_28057_16
unknown

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7469..7846
DNA (378bp) protein (126aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28057_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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7869..8312
DNA (444bp) protein (148aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
rifcsphigho2_01_scaffold_28057_18

Not on your lists

comp(8309..8665)
DNA (357bp) protein (119aa)
Protein phosphatase Fmp31 n=2 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) RepID=B6K051_SCHJY
Endoplasmic reticulum protein {ECO:0000313|EMBL:KHO52009.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
protein phosphatase Fmp31 (predicted)
rifcsphigho2_01_scaffold_28057_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(8725..10437)
DNA (1713bp) protein (571aa)
id=5046011 Tax=RBG_13_Pacearchaeota_36_9_curated
lipoprotein id=5045997 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DSBA oxidoreductase
rifcsphigho2_01_scaffold_28057_20

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comp(10694..11017)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MFG0_9EURY id=5103498 bin=GW2011_AR20_complete species=unknown genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62779.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 20 items

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