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rifcsphigho2_01_scaffold_28057_15

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_33_47

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 29 / 38 MC: 1
Location: 6651..7472

Top 3 Functional Annotations

Value Algorithm Source
rrp42; exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_13_Pacearchaeota_36_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 273.0
  • Bit_score: 302
  • Evalue 7.80e-79
Ribosomal RNA-processing protein RRP42 id=5800801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 246.0
  • Bit_score: 222
  • Evalue 4.30e-55
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 270.0
  • Bit_score: 212
  • Evalue 1.60e-52

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Taxonomy

RBG_13_Pacearchaeota_36_9_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 822
ATGCAAATTCCAAACATTAACCGAAGAAAGATATCAGTTTTGTTGAAAGAAAATAAAAGATTAGATGGCCGAAGTAATTATGAGCATAGGCCGATTCACATTGAGACTGGGGTTTCTAATTTAGCTGAAGGAAGTGCACGTGTTCGAATTGGAAAAACTGATGTTATAGTTGGTATTAAAATGAATGTTCAAGCGCCTTATACTGATCATCAAGATGAAGGTACTATGGTTGTTTCAATGGAATTTAGCTCTACCGCTGGAGAGCGATATGAACCTGGACCACCGAAGATGGACTCCATTGAAATAGCGCGTGTTGTTGATCGAGGAATTAGAGAGAGTGGATTTATTGATTGGAAAAAATTATGCATTGAATCTGGAAAAAGGGTTTGGTCGGTTAATGTTGATATTTATTGTATTAATGATGATGGAAACGCTATGGATGCAAGTGCGCTTGCTGCAGTAGTTGCTTTAAAAACTGCGGTATTCCCGGTTTATGACGAAGAAATAGAAAATGTTTCGTATGGAGAGTTTACAAAAAATCCTCTGCCTTTAACTTCTAATCTTCCTTTAACAATGACTTTTTATAAAATTGGCGACAATTTATTGCTTGATCCGACGAGAGACGAGGAAGATAGCAGTGATTCACGAATTACGCTTGCTATATCGGCGCCTAAAAAAGACAAAATGATTAATGCAATACAAAAAGGAGCTGAGACTCCTTTGTCTGAAAAAGATCTTGATGAAATTATTCAACAAATTGAAAAGACTTACGATTTAATCTTTCCAGATATTGAAAAGAAAATAAAAGATATTGTAAAATGA
PROTEIN sequence
Length: 274
MQIPNINRRKISVLLKENKRLDGRSNYEHRPIHIETGVSNLAEGSARVRIGKTDVIVGIKMNVQAPYTDHQDEGTMVVSMEFSSTAGERYEPGPPKMDSIEIARVVDRGIRESGFIDWKKLCIESGKRVWSVNVDIYCINDDGNAMDASALAAVVALKTAVFPVYDEEIENVSYGEFTKNPLPLTSNLPLTMTFYKIGDNLLLDPTRDEEDSSDSRITLAISAPKKDKMINAIQKGAETPLSEKDLDEIIQQIEKTYDLIFPDIEKKIKDIVK*