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rifcsphigho2_01_scaffold_5272_17

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: comp(10375..11196)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 263.0
  • Bit_score: 225
  • Evalue 8.70e-56
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=CG_Pacearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 273.0
  • Bit_score: 374
  • Evalue 1.20e-100
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 258.0
  • Bit_score: 215
  • Evalue 2.50e-53

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Taxonomy

CG_Pacearch_02 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 822
ATGAGCTCAATGGGACTTTCTAGTTTAACTTATAACACTTTATCTAAAATGTTTGCTGAAGGTAAGAGATTTGATGGACGTAAGTTAATTGAGCAAAGAGATTTTTCTGTTGAATATAACGTGTCTAATAAAGCTGAAGGAAGTGCTCGCGTTAGAATGGGAAAGACTGAAGTTGTCGTCGGAATTAAGTTAGAAGTTGGAACTCCCTATCCAGATTCTATGGATAAAGGTAATTTAATGGTTTCTGGAGATTTACTACCTTTGGCTTCGCCTCGTTTTGAAAGTGGTCCGCCTAAATTTGCAGCTATAGAGTTACCTAGATTGATTGACAGAATGATTCGTGAGTCGCACGTTATTGATTTGAAAAAGTTAGTAATAACTGAAGGCGAGAAAGTTTGGACTGTGATTATTGATATTTACCCAATAAATGATGATGGCGCTTTGATTGACGCTGCGAGCATAGGAGCAATTGCTGCTTTATTACAGACACATATACCTGCACTTGATAAAGATTGTAAAATAGATCATGAATCTAAATCTACAAAGAAATTGCCTCTTTTGGAAGATACCATACCTCTTTCATTTACATTCTACAAACTTGGAGAGTCTTTGATTATCGATCCTACTCGTGAAGAAGAAGAAGCTTGTGATGGAAAGATTGTATGGGGCATTTCTAATTGGAAAGGTAAAGAACATATGATACATTCTTGCCAGAAAGGCTTAGAGACTGCTATAACTCGTCAAAATGTAGATGAGATGATGAAACACTTGCCAAAAGTGTATGACGATACACTTAAAAAGCTTAAAAAGTTTTTGAAATGA
PROTEIN sequence
Length: 274
MSSMGLSSLTYNTLSKMFAEGKRFDGRKLIEQRDFSVEYNVSNKAEGSARVRMGKTEVVVGIKLEVGTPYPDSMDKGNLMVSGDLLPLASPRFESGPPKFAAIELPRLIDRMIRESHVIDLKKLVITEGEKVWTVIIDIYPINDDGALIDAASIGAIAALLQTHIPALDKDCKIDHESKSTKKLPLLEDTIPLSFTFYKLGESLIIDPTREEEEACDGKIVWGISNWKGKEHMIHSCQKGLETAITRQNVDEMMKHLPKVYDDTLKKLKKFLK*