ggKbase home page

rifcsphigho2_01_scaffold_5272

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5272_1
unknown

Not on your lists

comp(941..1264)
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_2
unknown

Not on your lists

comp(1313..2104)
DNA (792bp) protein (264aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_3
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(2107..2379)
DNA (273bp) protein (91aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_01_scaffold_5272_4
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(2379..2555)
DNA (177bp) protein (59aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_01_scaffold_5272_5
unknown

Not on your lists

comp(2578..2787)
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_6
unknown

Not on your lists

2868..3101
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_7
unknown

Not on your lists

3150..3866
DNA (717bp) protein (239aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_8
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3832..4749)
DNA (918bp) protein (306aa)
Aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=uncultured bacterium HF0130_06E03 RepID=E0XSV7_9BACT
rifcsphigho2_01_scaffold_5272_9
unknown

Not on your lists

comp(4795..5307)
DNA (513bp) protein (171aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(5361..6347)
DNA (987bp) protein (329aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B6F74
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Pacearch_02
30S ribosomal protein S2
rifcsphigho2_01_scaffold_5272_11
unknown

Not on your lists

6494..7033
DNA (540bp) protein (180aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_12
unknown

Not on your lists

7056..7970
DNA (915bp) protein (305aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(7971..9137)
DNA (1167bp) protein (389aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=CG_Pacearch_06
enolase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
rifcsphigho2_01_scaffold_5272_14
unknown

Not on your lists

9200..9517
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_15
unknown

Not on your lists

comp(9514..9951)
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(9987..10373)
DNA (387bp) protein (129aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
rifcsphigho2_01_scaffold_5272_17
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10375..11196)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=CG_Pacearch_02
Ribosomal RNA-processing protein RRP42
rifcsphigho2_01_scaffold_5272_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11285..11992)
DNA (708bp) protein (236aa)
Exosome complex exonuclease 1; K11600 exosome complex component RRP41 Tax=CG_Pacearch_06
exosome complex exonuclease Rrp41 id=5021996 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
exosome complex exonuclease Rrp41
rifcsphigho2_01_scaffold_5272_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11992..12705)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003632410
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_06
putative exosome complex RNA-binding protein 1
rifcsphigho2_01_scaffold_5272_20
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

12876..13124
DNA (249bp) protein (83aa)
hypothetical protein HlacAJ_12734 Tax=GWF2_OD1_38_8
hypothetical protein
rifcsphigho2_01_scaffold_5272_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13124..13531
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LL73_9EURY
twitching motility protein PilT; K07062 Tax=RBG_13_Pacearchaeota_36_9_curated
virulence-associated protein
rifcsphigho2_01_scaffold_5272_22
unknown

Not on your lists

comp(13562..14467)
DNA (906bp) protein (302aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_23
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

14598..15554
DNA (957bp) protein (319aa)
Glycosyl transferase, family 2 Tax=CG_Pacearch_03
glycosyl transferase family 2 id=95860 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
family 2 glycosyl transferase
rifcsphigho2_01_scaffold_5272_24

Not on your lists

15551..16705
DNA (1155bp) protein (385aa)
Glycoprotein 3-alpha-L-fucosyltransferase n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PVA2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN16847.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyltransferase
rifcsphigho2_01_scaffold_5272_25
unknown

Not on your lists

16695..18155
DNA (1461bp) protein (487aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_26
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

18130..19116
DNA (987bp) protein (329aa)
Glycosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTT9_9CLOT
group 1 glycosyl transferase Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
glycosyl transferases group 1 family protein
rifcsphigho2_01_scaffold_5272_27
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

19100..20050
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B5F12
hypothetical protein; K07027 Tax=RBG_16_OP11_Levybacteria_35_11_curated
hypothetical protein
rifcsphigho2_01_scaffold_5272_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20025..21605
DNA (1581bp) protein (527aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KCZ70620.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
transmembrane_regions id=5802851 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
rifcsphigho2_01_scaffold_5272_29
unknown

Not on your lists

21589..22155
DNA (567bp) protein (189aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5272_30
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

22152..22538
DNA (387bp) protein (129aa)
hypothetical protein Tax=AR13
Displaying items 1-30 of 53 in total

View Taxonomy