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rifcsphigho2_01_scaffold_5272_19

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: comp(11992..12705)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003632410 similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 222.0
  • Bit_score: 190
  • Evalue 1.60e-45
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 236.0
  • Bit_score: 336
  • Evalue 3.30e-89
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 221.0
  • Bit_score: 177
  • Evalue 3.90e-42

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 714
ATGAAAGAATTTGATAAAAACGAAGGAGAATATGAAGATTTTGGTTCTGAACCTCAGAGTCGCGTAATTGTTGTTCCTGGAGAAGTTGTTTCATCTGAAGAAGATTTCTTACCTGGGGAGGGAGCTAGACGCGAAGGAAAAGATATTGTTGCTTCTCGTTATGGATTAGCTGAAAAAGTTGGTAGAGTTATTAAGATAATTCCTTTTTCTGGAGCATTTATTCCTAGAAGAAATAATGTTATCATTGGGCGCGTATCTGATATAGTTCATAGTGGTTGGATAGTTGATATTGATTATGCTCAGAATGGATTTTTACCTTTAATGGAAAGCCCTAGATTTGTTAATAAGGGCGAGATGGACCAGTTCTTGGCCATAGGCGACGTAGTTGCTGCTAAGGTCTGGAGTGTAAGCCCTAAGGGAATTGATTTGGCTATGAAAGGAAAGGGTTTAGGAAAATTAGAGGGCGGATTTATATTTAGGGTAAACCCGAGTCGCGTGCCTAGAATTATTGGTCGCGAGGGAAGTATGATTAATTTAATAAAAGTAAATACTGGTTGCAATATAACTATTGGTCAGAATGGGTGGATTTGGGTTAAGGGAAATAGTTTAGATTCTGAATTAAAAGCTAGGAAGGCTATTGAATTTATTGCAGACAAAGTTTTAGTAACTGGATTAACTGAAAAAACTGAAAAATGGTTTGGGGAGAATAAATAA
PROTEIN sequence
Length: 238
MKEFDKNEGEYEDFGSEPQSRVIVVPGEVVSSEEDFLPGEGARREGKDIVASRYGLAEKVGRVIKIIPFSGAFIPRRNNVIIGRVSDIVHSGWIVDIDYAQNGFLPLMESPRFVNKGEMDQFLAIGDVVAAKVWSVSPKGIDLAMKGKGLGKLEGGFIFRVNPSRVPRIIGREGSMINLIKVNTGCNITIGQNGWIWVKGNSLDSELKARKAIEFIADKVLVTGLTEKTEKWFGENK*