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rifcsphigho2_01_scaffold_4611

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4611_1
unknown

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comp(1..201)
DNA (201bp) protein (67aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_2
unknown

Not on your lists

comp(252..1103)
DNA (852bp) protein (284aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_3
unknown

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comp(1161..1703)
DNA (543bp) protein (181aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_4
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

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comp(1764..2312)
DNA (549bp) protein (183aa)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
Uncharacterized protein (Fragment) id=5800258 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_4611_5
AR4, Woesearchaeaota, DPANN, Archaea

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comp(2388..2936)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F7A10
RNase P subunit p30 Tax=AR4
rifcsphigho2_01_scaffold_4611_6
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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3029..3232
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:BAI80085.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (str
rifcsphigho2_01_scaffold_4611_7

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3229..4167
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7644
PP-loop protein {ECO:0000313|EMBL:KHO53143.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsphigho2_01_scaffold_4611_8
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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4157..4843
DNA (687bp) protein (229aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKU8_METPE
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACL17244.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="M
rifcsphigho2_01_scaffold_4611_9

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5186..5749
DNA (564bp) protein (188aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box-binding protein
rifcsphigho2_01_scaffold_4611_10
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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5952..7973
DNA (2022bp) protein (674aa)
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
mcm; DNA replication initiator protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=5046315 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA replication initiator Cdc21/Cdc54
rifcsphigho2_01_scaffold_4611_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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7970..8734
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365774B
hypothetical protein
Putative uncharacterized protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_4611_12
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8786..9640)
DNA (855bp) protein (285aa)
hypothetical protein
Uncharacterized membrane protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
Uncharacterized membrane protein id=5041824 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_4611_13
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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10228..11427
DNA (1200bp) protein (400aa)
orc1/cdc6 family replication initiation protein; K10725 archaeal cell division control protein 6 Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
Cell division control protein 6 homolog id=2334556 bin=GWA2_Bacteroidetes_40_14 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
ORC1-type DNA replication protein
rifcsphigho2_01_scaffold_4611_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11468..13033
DNA (1566bp) protein (522aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5046338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_4611_15
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

13089..18215
DNA (5127bp) protein (1709aa)
DNA polymerase II large subunit; K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CG_Pacearch_05
DNA polymerase II large subunit (EC:2.7.7.7)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037716FE
rifcsphigho2_01_scaffold_4611_16
unknown

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18286..19170
DNA (885bp) protein (295aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_17
unknown

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19118..19381
DNA (264bp) protein (88aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(19422..20708)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKV9_METBM
hypothetical protein Tax=CG_Woesearch_01
ATPase
rifcsphigho2_01_scaffold_4611_19
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(20946..21242)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J589_HALJB
Uncharacterized protein {ECO:0000313|EMBL:KDE59425.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
rifcsphigho2_01_scaffold_4611_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(21271..21678)
DNA (408bp) protein (136aa)
translation initiation factor 2 subunit beta; K03238 translation initiation factor 2 subunit 2 Tax=RBG_13_Woesearchaeota_36_6_curated
translation initiation factor IF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 id=5041823 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 2 subunit beta
rifcsphigho2_01_scaffold_4611_21
AR11, Woesearchaeaota, DPANN, Archaea

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21808..22017
DNA (210bp) protein (70aa)
seg id=5800104 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_01_scaffold_4611_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22063..22725)
DNA (663bp) protein (221aa)
Transcription factor E Tax=AR17
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
rifcsphigho2_01_scaffold_4611_23
unknown

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comp(23099..23224)
DNA (126bp) protein (42aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_24
AR11, Woesearchaeaota, DPANN, Archaea

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comp(23247..23726)
DNA (480bp) protein (160aa)
hypothetical protein; K03552 holliday junction resolvase, archaea type Tax=AR11
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type id=5046341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
resolvase, holliday junction-type
rifcsphigho2_01_scaffold_4611_25

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comp(23704..24636)
DNA (933bp) protein (311aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
rifcsphigho2_01_scaffold_4611_26
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(24629..25276)
DNA (648bp) protein (216aa)
hydrolase related to 2-haloalkanoic acid dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=CG_Woesearch_03
HAD hydrolase, family IA, variant 1 n=1 Tax=Solobacterium moorei F0204 RepID=E7MQJ9_9FIRM
haloacid dehalogenase superfamily enzyme, subfamily IA
rifcsphigho2_01_scaffold_4611_27
unknown

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comp(25351..26262)
DNA (912bp) protein (304aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_28
CG_Pacearch_05, Pacearchaeota, Archaea

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26372..27466
DNA (1095bp) protein (365aa)
YARS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Pacearch_05
PREDICTED: tyrosine--tRNA ligase, cytoplasmic n=1 Tax=Ochotona princeps RepID=UPI00032AFD67
Tyrosyl-tRNA synthetase
rifcsphigho2_01_scaffold_4611_29
unknown

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comp(27341..27829)
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4611_30
unknown

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comp(27804..28724)
DNA (921bp) protein (307aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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