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rifcsphigho2_01_scaffold_17720

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_17720_1
unknown

Not on your lists

1..135
DNA (135bp) protein (45aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17720_2

Not on your lists

80..1195
DNA (1116bp) protein (372aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KHO51553.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KHO51553.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUZ5_9EURY rbh
rifcsphigho2_01_scaffold_17720_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

1246..1473
DNA (228bp) protein (76aa)
transmembrane_regions Tax=AR15
rifcsphigho2_01_scaffold_17720_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

1481..1924
DNA (444bp) protein (148aa)
Tax=AR9
rifcsphigho2_01_scaffold_17720_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1926..2237)
DNA (312bp) protein (104aa)
seg Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_01_scaffold_17720_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2290..3030
DNA (741bp) protein (247aa)
GTP-binding protein HSR1-related protein; K06948 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
GTP-binding protein YlqF; K06948 id=5047469 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
GTPase, MMR1/HSR1 family protein
rifcsphigho2_01_scaffold_17720_7
RifOxyA12_full_OD1_Moranbacteria_44_15_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3143..3559
DNA (417bp) protein (139aa)
DoxX family protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S2I2_HALTV
DoxX family protein; K15977 putative oxidoreductase Tax=RifOxyA12_full_OD1_Moranbacteria_44_15_curated
DoxX family protein
rifcsphigho2_01_scaffold_17720_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3581..5788)
DNA (2208bp) protein (736aa)
DEAD/DEAH box helicase; K10896 fanconi anemia group M protein Tax=AR9
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Hef nuclease
rifcsphigho2_01_scaffold_17720_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5813..6421)
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE66855.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein id=1811495 bin=GWB2_Pelobacter_53_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
rifcsphigho2_01_scaffold_17720_10
unknown

Not on your lists

comp(6441..6701)
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17720_11
unknown

Not on your lists

comp(6754..7059)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17720_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(7127..7270)
DNA (144bp) protein (48aa)
Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_17720_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(7456..8193)
DNA (738bp) protein (246aa)
Peptidase M50 Tax=RBG_13_Woesearchaeota_36_6_curated
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_17720_14

Not on your lists

comp(8232..9377)
DNA (1146bp) protein (382aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=5048385 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RNA methylase
Uncharacterized protein {ECO:0000313|EMBL:KHO45057.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_01_scaffold_17720_15
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(9388..10254)
DNA (867bp) protein (289aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) id=14429238 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
DNA gyrase subunit A Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
rifcsphigho2_01_scaffold_17720_16
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10235..11152)
DNA (918bp) protein (306aa)
DNA gyrase subunit A id=5800238 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA gyrase subunit A Tax=AR15
gyrA; DNA gyrase subunit A
rifcsphigho2_01_scaffold_17720_17

Not on your lists

comp(11149..11889)
DNA (741bp) protein (247aa)
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5048384 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA gyrase, A subunit (EC:5.99.1.3)
rifcsphigho2_01_scaffold_17720_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12040..13563)
DNA (1524bp) protein (508aa)
gdhA1; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase {ECO:0000313|EMBL:CAN94468.1}; EC=1.4.1.3 {ECO:0000313|EMBL:CAN94468.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polya
Glutamate dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F2A8_SORC5 rbh
rifcsphigho2_01_scaffold_17720_19

Not on your lists

comp(13644..14285)
DNA (642bp) protein (214aa)
Marine sediment metagenome DNA, contig: S12H4_L02343 {ECO:0000313|EMBL:GAI83156.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
rifcsphigho2_01_scaffold_17720_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14324..14941)
DNA (618bp) protein (206aa)
hypothetical protein
hypothetical protein Tax=AR11
id=5800168 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_17720_21
unknown

Not on your lists

comp(15368..15625)
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17720_22

Not on your lists

15856..16728
DNA (873bp) protein (291aa)
prophage antirepressor id=5045949 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Prophage antirepressor {ECO:0000313|EMBL:KHO46294.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
phage antirepressor protein
rifcsphigho2_01_scaffold_17720_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16769..18937)
DNA (2169bp) protein (723aa)
seg Tax=CG_Woesearch_02
seg id=5800082 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_17720_24
unknown

Not on your lists

19249..19497
DNA (249bp) protein (83aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17720_25

Not on your lists

19503..19730
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_17720_26

Not on your lists

19742..20242
DNA (501bp) protein (167aa)
Marine sediment metagenome DNA, contig: S01H1_S08208 {ECO:0000313|EMBL:GAG06249.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_17720_27
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

21103..22389
DNA (1287bp) protein (429aa)
RNA-metabolising metallo-beta-lactamase; K07021 Tax=AR9
Beta-lactamase domain protein id=5800253 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA-metabolising metallo-beta-lactamase
rifcsphigho2_01_scaffold_17720_28
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

22605..23210
DNA (606bp) protein (202aa)
hypothetical protein; K04802 proliferating cell nuclear antigen Tax=AR9
DNA polymerase sliding clamp id=5800255 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase sliding clamp
rifcsphigho2_01_scaffold_17720_29
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

23360..23995
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369AC39
hypothetical protein Tax=AR9
hypothetical protein
rifcsphigho2_01_scaffold_17720_30
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

23997..24584
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376EC73
Putative uncharacterized protein Tax=AR9
hypothetical protein
Displaying items 1-30 of 31 in total

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