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rifcsphigho2_01_scaffold_23410

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_23410_1
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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1..435
DNA (435bp) protein (145aa)
DNA gyrase subunit B (EC:5.99.1.3) Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=2060429 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rifcsphigho2_01_scaffold_23410_2
AR11, Woesearchaeaota, DPANN, Archaea

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432..1748
DNA (1317bp) protein (439aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=AR11
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=5799808 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_23410_3
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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1988..2230
DNA (243bp) protein (81aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Putative uncharacterized protein id=4769620 bin=GWA2_OP3_52_12 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rifcsphigho2_01_scaffold_23410_4
Helicobacter canadensis, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(2220..3374)
DNA (1155bp) protein (385aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
succinyl-diaminopimelate desuccinylase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B5B201
succinyl-diaminopimelate desuccinylase
rifcsphigho2_01_scaffold_23410_5
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

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3671..4420
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW30014.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWD2_52_7.;"
rifcsphigho2_01_scaffold_23410_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4457..7741)
DNA (3285bp) protein (1095aa)
Peptidase S8/S53 id=4688818 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
psp3; putative alkaline protease Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_23410_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(7812..8732)
DNA (921bp) protein (307aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY id=5103042 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protease IV Tax=AR11
Signal peptide peptidase SppA, 36K type
rifcsphigho2_01_scaffold_23410_8
GWC2_OD1_39_14, Parcubacteria, Bacteria

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9133..9501
DNA (369bp) protein (123aa)
Tax=GWC2_OD1_39_14
Displaying 8 items

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