ggKbase home page

rifcsphigho2_01_scaffold_7686_7

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_48_23

near complete RP 33 / 55 MC: 6 BSCG 6 / 51 MC: 1 ASCG 32 / 38
Location: comp(8224..8460)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase, subunit h (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=AR9 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 77.0
  • Bit_score: 96
  • Evalue 1.40e-17
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 4.30e-14
DNA-directed RNA polymerase subunit H n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RPOH_PYRAB similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 1.50e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR9 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 237
ATGAGCTTCACCATCACCAAACATTCGTTAGTGCCCAAGCACAGTAAAGTGAGTGATGCAGAGAAGCAAAAATTGTTTGCCACGTATGCTATCACCGAGAAAGAGCTTCCCAAGATTCTGAAAGATGATCCGGCCATTGCTGCACTGGAAGCAGAGCCGGGCACCGTCATTAAAATTGAGCGTGACAGCCCGACGGCTGGCGTCGCGTTCTATTATCGGGTGGTGGCCAATGGATAG
PROTEIN sequence
Length: 79
MSFTITKHSLVPKHSKVSDAEKQKLFATYAITEKELPKILKDDPAIAALEAEPGTVIKIERDSPTAGVAFYYRVVANG*