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rifcsphigho2_01_scaffold_7686_10

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_48_23

near complete RP 33 / 55 MC: 6 BSCG 6 / 51 MC: 1 ASCG 32 / 38
Location: comp(9942..11459)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa. similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 482.0
  • Bit_score: 675
  • Evalue 4.80e-191
tRNA-splicing ligase RtcB n=1 Tax=Fischerella muscicola RepID=UPI000300B63A similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 482.0
  • Bit_score: 678
  • Evalue 5.30e-192
protein of unknown function UPF0027 similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 482.0
  • Bit_score: 675
  • Evalue 9.70e-192

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Taxonomy

Gloeocapsa sp. PCC 7428 → Gloeocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGACTCTGTTGCAGCAGCGTATGGACGAAGAACATGGAGAAAGGCAACAGCACCAGGCAGGTCCCCCACCAGAACTGAAACGCGTCAGTGATGTTGTCTGGGAACTTCCTGCTTCTTACAAGAAAGGCATGCGGGTTCCTGCTCGTATCATTGCGACGGAAGAACTGATGCAAGCCATGGATCCGGGCGTGTTTAATCAAGTAACAAATGTAGCGACATTGCCGGGCATTCAAAGTTATTCTTATTGTATGCCAGATGGCCACTGGGGCTACGGTTTTCCCATTGGCGGAGTAGCCGCTTTTGATCCAAAAGAAGGGGGTGTTATCTCGCCCGGCGGCATTGGCTTTGATATAAATTGCGGCATGCGGCTGATTACGACCAACCTGACTGCTGACCAAGTCAAGCCCCGCATCAAAGAGATAGTCGATGCGCTCTACAAAGCCGTTCCTGCGGGCGTCGGCTGCAAAGGGTTTGTCAAGCTCTCTAAAGAAGAATTTAAAGACGTCATGCGTGATGGCGCGCAATGGTGCCTGAAGAAAGGCTTCGCCTGGAAAGAAGATATTGAGCACATCGAAGATCAGGGAAAAATTTCCCAAGCGAACCCAGACAAAGTTTCAGAGAAAGCAGTGAAGCGTGGCTTCGACCAAATCGGGACTTTAGGCAGTGGCAATCATTATCTGGAAATTCAGGAAGTGCGCGAGGGCAATATCTTTGACCAGAAAGCCGCTAAAGCCATGGGCATTACCGGGCCTGGGCAGATTGTTATCATGGTGCATTGCGGCTCTCGCGGCTTCGGCCACCAGATCGGCACGGATTATTTGCGGGTGTTTCTCGACGTGATGCCAAAATATGGCATTGAGATTCTCGATCAGGAATTGGCCTGTGCCCCTTTCAATTCGCCGGAAGGGCAGGACTATTACCAAGCCATGGCCTGTGCCGCAAATATGGCTTTTGTGAATCGGCAGGTCATCACGCATCGCATCCGCGAAGTCTTTAGCAAAGCCTTTGGCAAGAGTGCCGAAGATCTGGGCATGCACTTGGTGTATGACGTGGCGCACAACATTGCCAAGCTGGAAAAGCATATGGTCGACGGAAAAGAGAAAGAGCTGCTGGTGCATCGCAAAGGGGCGACGAGAGCGTTTGGCCCGGCACGCGGAGCATTCCTGCCGAAAGATTATGCAAAGATAGGGCAGCCCGTCATCATCGGCGGCTCCATGGAAACCGGCTCGTATTTGCTCGTCGGCACGGATGGGGCTGATATGACTTTTGCTTCTACAGCCCATGGCGCTGGCAGGACCATGAGCCGGGCTGCTGCCAAACGAAATATTCGCGGTGATCAGTTGCAGAAAGACATGGAAAAAAGCGGCATTTACGTGCACGCCGTCACGATGGCCGGGCTGGCAGAAGAAGCAGGATCGGCGTATAAAGATTTGAATCTGGTAGTGGACGCGCTGGAAGCGGCGGGCATCACTCGGCGGGTGGTGGCGCTGAAGCCGATTGGGAATGTGAAAGGGTGA
PROTEIN sequence
Length: 506
MTLLQQRMDEEHGERQQHQAGPPPELKRVSDVVWELPASYKKGMRVPARIIATEELMQAMDPGVFNQVTNVATLPGIQSYSYCMPDGHWGYGFPIGGVAAFDPKEGGVISPGGIGFDINCGMRLITTNLTADQVKPRIKEIVDALYKAVPAGVGCKGFVKLSKEEFKDVMRDGAQWCLKKGFAWKEDIEHIEDQGKISQANPDKVSEKAVKRGFDQIGTLGSGNHYLEIQEVREGNIFDQKAAKAMGITGPGQIVIMVHCGSRGFGHQIGTDYLRVFLDVMPKYGIEILDQELACAPFNSPEGQDYYQAMACAANMAFVNRQVITHRIREVFSKAFGKSAEDLGMHLVYDVAHNIAKLEKHMVDGKEKELLVHRKGATRAFGPARGAFLPKDYAKIGQPVIIGGSMETGSYLLVGTDGADMTFASTAHGAGRTMSRAAAKRNIRGDQLQKDMEKSGIYVHAVTMAGLAEEAGSAYKDLNLVVDALEAAGITRRVVALKPIGNVKG*