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rifcsphigho2_01_scaffold_4782

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4782_1
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1..447)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MPX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65346.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-pl
transposase
rifcsphigho2_01_scaffold_4782_2
unknown

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617..982
DNA (366bp) protein (122aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_3
unknown

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1020..1241
DNA (222bp) protein (74aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_4
unknown

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comp(1274..1561)
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1655..5290
DNA (3636bp) protein (1212aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003662C39
translation elongation factor aef-2; K03234 elongation factor 2 Tax=RBG_13_Pacearchaeota_36_9_curated
Elongation factor 2
rifcsphigho2_01_scaffold_4782_6
unknown

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comp(5321..5458)
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_7
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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5578..6969
DNA (1392bp) protein (464aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RBG_16_Pacearchaeota_35_8_curated
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase id=1261018 bin=GWE1_Spirochaetes_32_154 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
rifcsphigho2_01_scaffold_4782_8
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6991..7704)
DNA (714bp) protein (238aa)
Tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RBG_16_Planctomycetes_55_9_curated
Thymidylate kinase n=1 Tax=Clostridium ultunense Esp RepID=M1ZGH8_9CLOT
tmk; thymidylate kinase
rifcsphigho2_01_scaffold_4782_9
unknown

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7847..8314
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_10
unknown

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8481..8924
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_11

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comp(8986..9213)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z0U6_9BACT
Marine sediment metagenome DNA, contig: S06H3_L07732 {ECO:0000313|EMBL:GAI22960.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Exonuclease VII small subunit
rifcsphigho2_01_scaffold_4782_12

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comp(9210..10550)
DNA (1341bp) protein (447aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="un
exodeoxyribonuclease vii, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYA5_RUMGN id=85223 bin=ACD57 species=[Ruminococcus] gnavus genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsphigho2_01_scaffold_4782_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10656..11927
DNA (1272bp) protein (424aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E3C05
Elongation factor 1-alpha
rifcsphigho2_01_scaffold_4782_14
CG_Pacearch_01, Pacearchaeota, Archaea

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12077..12640
DNA (564bp) protein (188aa)
Marine sediment metagenome DNA, contig: S03H2_S02756 Tax=CG_Pacearch_01
rifcsphigho2_01_scaffold_4782_15
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(12644..14008)
DNA (1365bp) protein (455aa)
Divergent AAA domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDR0_9FIRM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CEA14173.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Meth
rifcsphigho2_01_scaffold_4782_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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14404..15627
DNA (1224bp) protein (408aa)
DNA primase Tax=RBG_13_Pacearchaeota_36_9_curated
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_4782_17

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15683..15886
DNA (204bp) protein (68aa)
UPF0150 protein AF_1072 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1072_ARCFU id=5103599 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S12H4_L00628 {ECO:0000313|EMBL:GAI78303.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_01_scaffold_4782_18
AR18, Woesearchaeaota, DPANN, Archaea

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15887..16114
DNA (228bp) protein (76aa)
hypothetical protein; K07339 hypothetical protein id=5048874 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K07339 hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_01_scaffold_4782_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(16138..16629)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367FBB2
metal dependent phosphohydrolase Tax=RBG_13_Pacearchaeota_36_9_curated
RelA/SpoT family protein
rifcsphigho2_01_scaffold_4782_20
unknown

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comp(16631..16927)
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_21
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

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comp(16924..17238)
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
rifcsphigho2_01_scaffold_4782_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

17326..18045
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F49F5
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator TrmB
rifcsphigho2_01_scaffold_4782_23
unknown

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18388..19023
DNA (636bp) protein (212aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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19070..19534
DNA (465bp) protein (155aa)
Marine sediment metagenome DNA, contig: S06H3_L02822 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_4782_25
Microgenomates bacterium GW2011_GWA2_47_8, Microgenomates, Bacteria

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19954..21180
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
Uncharacterized protein {ECO:0000313|EMBL:KKU82972.1}; TaxID=1618503 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_47_8.;"
rifcsphigho2_01_scaffold_4782_26
unknown

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21281..21394
DNA (114bp) protein (38aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4782_27
unknown

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21387..21605
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 27 items

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