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rifcsphigho2_01_scaffold_15270

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_15270_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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170..478
DNA (309bp) protein (103aa)
LSU ribosomal protein L44E Tax=RBG_13_Pacearchaeota_36_9_curated
50S ribosomal protein L44E; K02929 large subunit ribosomal protein L44e id=5048709 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_15270_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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728..1264
DNA (537bp) protein (179aa)
30S ribosomal protein S3Ae n=2 Tax=Nanoarchaeum RepID=RS3A_NANEQ
rps3AE; 30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae Tax=RBG_13_Pacearchaeota_36_9_curated
30S ribosomal protein S3Ae
rifcsphigho2_01_scaffold_15270_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(1268..2266)
DNA (999bp) protein (333aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S03H2_S02685 Tax=RBG_13_Pacearchaeota_36_9_curated
Homing endonucleases id=5241833 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_15270_4
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

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2452..2913
DNA (462bp) protein (154aa)
rfaE; cytidylyltransferase/carbohydrate (or pyrimidine) kinase (EC:2.7.-.-)
RfaeE domain II n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYN0_HALOH
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:KKR89193.1}; TaxID=1619006 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
rifcsphigho2_01_scaffold_15270_5

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3095..3664
DNA (570bp) protein (190aa)
seg id=5800818 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62148.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_01_scaffold_15270_6
unknown

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comp(3618..4481)
DNA (864bp) protein (288aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15270_7
unknown

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comp(4568..4924)
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15270_8
CG_Pacearch_05, Pacearchaeota, Archaea

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5000..5839
DNA (840bp) protein (280aa)
GTP-binding protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YT8_METBU
GTP-binding protein YlqF; K06948 Tax=CG_Pacearch_05
GTP-binding protein YlqF
rifcsphigho2_01_scaffold_15270_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(5925..6500)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsphigho2_01_scaffold_15270_10
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(6729..7304)
DNA (576bp) protein (192aa)
phosphoglycerate mutase (EC:5.4.2.1) Tax=CG_Pacearch_04
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AC5BB
putative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
rifcsphigho2_01_scaffold_15270_11
CG_Pacearch_05, Pacearchaeota, Archaea

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7368..8579
DNA (1212bp) protein (404aa)
Signal recognition particle GTPase n=1 Tax=sediment metagenome RepID=D9PEV9_9ZZZZ
signal recognition particle, receptor; K03110 fused signal recognition particle receptor Tax=CG_Pacearch_05
Signal recognition particle GTPase
rifcsphigho2_01_scaffold_15270_12
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

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8579..9250
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H4M4_DENA2
Uncharacterized protein {ECO:0000313|EMBL:KKR71008.1}; TaxID=1618482 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
hypothetical protein
rifcsphigho2_01_scaffold_15270_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9350..10723
DNA (1374bp) protein (458aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=RBG_13_Pacearchaeota_36_9_curated
SRP54-type protein, GTPase protein
rifcsphigho2_01_scaffold_15270_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10988..11470
DNA (483bp) protein (161aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying 14 items

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