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rifcsphigho2_01_scaffold_3677

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_3677_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5..1927)
DNA (1923bp) protein (641aa)
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_3677_2

Not on your lists

2077..2424
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ id=5103294 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO55288.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifcsphigho2_01_scaffold_3677_3

Not on your lists


comp(2877..3518)
DNA (642bp) protein (214aa)
Diphthamide biosynthesis protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0H6_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KHO51458.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
diphthamide biosynthesis protein
rifcsphigho2_01_scaffold_3677_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4116..4541)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
hypothetical protein; K09152 hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_3677_5

Not on your lists

comp(4614..4958)
DNA (345bp) protein (115aa)
Marine sediment metagenome DNA, contig: S12H4_S17306 {ECO:0000313|EMBL:GAJ05229.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta
rifcsphigho2_01_scaffold_3677_6

Not on your lists

comp(4989..5288)
DNA (300bp) protein (100aa)
Marine sediment metagenome DNA, contig: S03H2_S01041 {ECO:0000313|EMBL:GAH60460.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_3677_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5342..5479)
DNA (138bp) protein (46aa)
Marine sediment metagenome DNA, contig: S12H4_L00299 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_3677_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(5791..6009)
DNA (219bp) protein (73aa)
50S ribosomal protein L37Ae n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RL37A_META3
rpl37ae; 50S ribosomal protein L37 Tax=CG_Pacearch_05
50S ribosomal protein L37Ae
rifcsphigho2_01_scaffold_3677_9
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

6136..6981
DNA (846bp) protein (282aa)
id=5050962 Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_3677_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(7066..7809)
DNA (744bp) protein (248aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
rpl11p; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Pacearchaeota_36_9_curated
LSU ribosomal protein L11P
rifcsphigho2_01_scaffold_3677_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(7857..8354)
DNA (498bp) protein (166aa)
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_13_Pacearchaeota_36_9_curated
NusG antitermination factor id=5799592 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_01_scaffold_3677_12
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8624..8809)
DNA (186bp) protein (62aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=RBG_13_Pacearchaeota_33_26_curated
protein translocase SEC61 complex, gamma subunit
Preprotein translocase subunit SecE id=5050966 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_3677_13
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

8969..10780
DNA (1812bp) protein (604aa)
oligoendopeptidase Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PepF/M3 family oligoendopeptidase id=1932321 bin=GWD2_Nitrospirae-related_57_8 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
rifcsphigho2_01_scaffold_3677_14
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(10949..11410)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037620E7
RNA-directed DNA polymerase Tax=CG_Pacearch_01
Retron-type reverse transcriptase
rifcsphigho2_01_scaffold_3677_15
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(11413..12087)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037620E7
Putative uncharacterized protein Tax=GWA1_OD1_36_12
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_01_scaffold_3677_16
unknown

Not on your lists

comp(12265..13107)
DNA (843bp) protein (281aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3677_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13196..14308)
DNA (1113bp) protein (371aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_13_Pacearchaeota_36_9_curated
Cell division protein FtsZ
rifcsphigho2_01_scaffold_3677_18
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(14391..15116)
DNA (726bp) protein (242aa)
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
peptidyl-prolyl cis-trans isomerase Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsphigho2_01_scaffold_3677_19
unknown

Not on your lists

comp(15174..15545)
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3677_20
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15594..15803)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QAA1_9EURY id=5103731 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=CG_Pacearch_04
rifcsphigho2_01_scaffold_3677_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


15855..16247
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
translation initiation factor IF-5A; K03263 translation initiation factor 5A Tax=CG_Pacearch_03
Translation initiation factor 5A
rifcsphigho2_01_scaffold_3677_22
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

16449..16613
DNA (165bp) protein (55aa)
hypothetical protein
id=5103024 bin=GW2011_AR20_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_3677_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16664..18031
DNA (1368bp) protein (456aa)
membrane-associated Zn-dependent protease Tax=RBG_13_Pacearchaeota_36_9_curated
peptidase m50 id=5050972 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptidase M50
rifcsphigho2_01_scaffold_3677_24
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18573..18929)
DNA (357bp) protein (119aa)
hypothetical protein
id=5103013 Tax=RBG_16_Pacearchaeota_35_8_curated
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_3677_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

19168..19617
DNA (450bp) protein (150aa)
hypothetical protein
id=5800786 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_3677_26
unknown

Not on your lists

19789..19953
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3677_27

Not on your lists

comp(19954..21033)
DNA (1080bp) protein (360aa)
glycosyl transferase family protein id=5048704 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glycosyl transferase family protein {ECO:0000313|EMBL:KHO45367.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
bifunctional SAM-dependent methyltransferase, type 11,/glycosyltransferase, family 2, hypothetical protein
rifcsphigho2_01_scaffold_3677_28
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


21158..21781
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E9331
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 Tax=AR19
50S ribosomal protein L1
rifcsphigho2_01_scaffold_3677_29
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


21792..22619
DNA (828bp) protein (276aa)
50S ribosomal protein L10 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LI18_THEBM
ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RBG_16_Pacearchaeota_35_8_curated
50S ribosomal protein P0 (L10p)
rifcsphigho2_01_scaffold_3677_30
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

22633..22926
DNA (294bp) protein (98aa)
50S ribosomal protein L12 n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2Z2_9ARCH
rpl12p; 50S ribosomal protein L12P; K02869 large subunit ribosomal protein L12 Tax=CG_Pacearch_03
rpl; 50S ribosomal protein L12
Displaying items 1-30 of 58 in total

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