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rifcsphigho2_01_scaffold_3844_8

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_14

partial RP 30 / 55 MC: 5 BSCG 17 / 51 MC: 1 ASCG 26 / 38
Location: comp(3287..8170)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_33_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 836.0
  • Bit_score: 1181
  • Evalue 0.0
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA2_METJA id=5103776 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 816.0
  • Bit_score: 930
  • Evalue 1.90e-267
DNA-directed RNA polymerase subunit A'' similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 816.0
  • Bit_score: 930
  • Evalue 5.40e-268

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Taxonomy

RBG_13_Pacearchaeota_33_26_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 4884
ATGGAAATCATACGAAAGAAAATAAAGGGTCTGAGGTTTGGACTGCTCAATCCGGAGCTCATCAAGAAAATCTCTTCAGCCAAGGTTGTCTCTCCTGAACTCTACGATGTAGACGGCTATCCTGTAGACGGAGGATTGATGGATTTGAGATTGGGAGCTATTGACCCCGGAGTAAAGTGCAGAACCTGCGGAGGCGGATTAAAAGAGTGTTTAGGGCATCCCGGAAGCATCGAGCTGGCAAGGCCAATCATCCACATAAAATACATCCAGGTAATAGAAAGATTTTTAAGAAGCATATGCCAGAACTGCGGCAAGGCTCTTATTTCAGAAGAGCAGATAAAGAAATACTCAAGCAAGAACAGAATAAAGAAAGCCAGAGACACAAAGAAATGCCCCCACTGCAATGCCTCCCAGGAAAAGATAAGATTAGAAAAGCCATACAACTTCATAATAGGAAAAAAGAGGCTGTTTCCGACAGAGATAAGAGAAGCTCTTGCAAAAATATCAAATGAAGATATTAAGCTTCTCGGAGTAGATCCAAGAAACTTCAGGCCGGAGTGGGCGGTAATGTCAATCCTATTGGTGCCTCCGGTTACAGTAAGGCCTTCAATAACTCTTGAAACAGGAGAAAGAAGCGAGGATGATCTGACTCACAAGCTTTCAGACATAGTCCGTGCCAACCAAAGGCTGTGGGAAAACCTAAACGCAGGAGCTCCTGAAGTAATTATTGAAGATTTATGGGACCTGCTTCAATACCACATAACTACTTTCTTTGACAATGACGTGGCGCGAATTCCCCCAGCCCGTCATCGTTCAGGCCAGCCCCTAAAAACAATAACTGAAAGAATAAAAGGAAAACAGGGAAGAATAAGAAAGAATCTGGCCGGAAAGAGGGTAAATTTCAGCAGCCGTACGGTCATAAGCCCCGACCCCTCCCTGAATATAAATGAGATAGGAATTCCTCTTGATGTAGCAAAAATAATAACAGTAGAGGAGTCTGTAACCTCATTAAACATAGAAATGATGAAGAAACTCGTTGCAAGCGAGAAATATCCGGGGGCTAATTATATAGTAAGGCCCGACGGAAAGAAGAAAAGAATTACCTCCGACTTAAGGCAGGAGATAATAAACGAGCTCCAGCCGGGATACAAAGTAGAAAGGCACCTGATGGACGGGGATGTTGTTTTGTTCAACAGGCACCCTTCCCTTCACAGGGCAAGCATTATGTCCCACTATGTTAAAGTCCTTCCATACAAGACATTCAGGTTCCATCCTGCAGCAGCATTCCCATACAACGCAGACTTTGACGGAGACGAGATGAACATACACTCTCCGCAGACAGAAGAAGCTAGAGCAGAGGCAATAGTCCTTCTGGATGTAAAGAGAAATTTAATTTCTCCTAAGAACAGCTCAAACCTTCTGGGATGCATCTCTGACGCCGTTACAGGAAATTATATGATGGGCAATGAAACTCTCCTTAAAGAAGATGCCATGCAGCATTTATACAGGGCAGGCATAAAGCAGGAATTCAGCAAAAAGACCGTCTCCGGAATAGAAATATTCAAGTGCCTGATGCCAAAAGAATTTTCCGGAAGGGAATTCAAGAAACTTGACAACAAGCTCTTTGGGGTTGAAGAGGGTGCTTTAATAAAAGAACTTGACAGGGTAACTGGAAGAGACAGAACAATTAACGTCTTGAGAAGCATATTTGCCCTGGGCGTCAGCTACCTGTCAAGAAATGGAATAACTATTTCTCTAAAAGACTTAAGCGTAAATGAAAAAGTAAGGGAGAGTGTCAGGCAGGTTTTTGAAGATTCTGAGAAAGAGACTAATGAGATAATTGAGCTTTACAATAACGGAAAGATTGAGCAGATACCTGGAAAGACAAAAGAAGAAAGCAGGGAAATTAAGATACTGCAAATTTTGAACTCTGTAAGAACAAAAATAGGAAAAGTTGTCAAGGATGAATTTCCGGAAGACAGCCCAGTAAGCCATATGATAAACTCGGGAGCCGGGGGGAACCTTCTCAACATCACGCAAACTTCATGCTCTCTCGGCCAGCAATCCCTGTGGAATAAAAGAATTGAAATAGGATACACTCACAGGACTCTCCCCTTCTTCAAGAAGCATGACTTGTCTCCTCTCTCAAGAGGATTTATTTACTCATCTTATTCAAAGGGCCTGAAGCCCCACGAATTCTTCTTCGGAGCTATTACGGGCAGGGACTCTTTAATGGATTTAGCATTGAGAACTCCAAAATCGGGTTATCTGTACAGGCGCCTCGCTAATGCTCTTCAGGACCTGAAAGTTGAATATGACGGCACTATAAGAGATGCCTCAGAAAACATCGTGCAGTTTACTTATGGAACTGATGGAAGCGATGTTTCCAAGCTTCACTTAAAGAACAGCAAGATATCTCCGGGAGAGGGAATTGGAATAGTAACTGCACAGAGCTTCGGTGAGCCAAGCACGCAGATGAGCTGCCGCGCGGAAGAGAAGATTATTGTCAAAATAGGAAACAAAATCCGTACAGCAAAGATAGGGGAATTCATTGATATGCTGATGCTGAAGAGAGGTTACCATAAGTTGAACAATAATTCAGATGTACTGCCTTTGCATGACCTTGAAGTATTCGTGCCGAGCCTTAATCATGAGGAAAAAATAGAATGGAAGCGTGTTACTGAGTGCAGCAGGCATGCTACTGATAAAAAATTAATGAAATTAACAACGGCATCCGGAAGAGAGATTATCTGCACTGATAACCATTCATTTGTAACACGAAAAGAGAATAAAATAAACCCTGTTAAAGGAAATGAGTTACATGTCGGAGATAGAATTCCGGTGATGAATAATTTCTTCAATACTGTACCCCTGCAAAGTATTTCTGTGCAAAGTTATATTCAGGACGAGAATGTTGTCTTAGATGATACTATGCTCACTAAACCGGGCACAGTGCTAAAACCCATGCGTAATACCATTGAGCTTAATGCTCAGACAGGGTGGTTTATCGGAGCTTACTTAGCAGAAGGCTCTGGAAACATAAACCATGTAAGTATATCCAACCTTGATGATTCTTATATTTCCCAGGCAAAAGCATTTGCGGGCTCTGTCGGATTAAACTATGTAGAAAACTTCCATCATAGGGGATTTGCAGAGAGCAGGGATCTCAAAATCAATTCTACGCTTCTTGGAAAATTTATTACTTCCTGCTGCGGGCAGGGAGCCGACTTCAAGATGGTGCCTGATTTTGCTTATAGTGCGCCAGACTCATTCGTTTCAGGATTACTCCGCGGATACTTTGACGGCGATGGTAATTTCCATGTAGACAGAAATATGATTCGCTGCTCTTCAAACTCCAGAGAATTAAGAGATAACATCGCTTTATTGCTCTCGCGCTTCAAAATATTTTCCTTCAAAACAACTGATAAGAAGGGGCAGCACTGGCTCTTAATTCCATACAAGTACGCGCCGCTCTACCTGCAGAATATAGGAAGCGATATTGACTATAAGCTTGCAGCATTGAAACAACTGGCAGAAAGAGCAAAGCGCTTCTGGAATGAGCAAAGCAGGGATTACACAGACATGATTTCCGGATTTGGGGAACTTTTTAGAGATACTGCAAAGAAAGTGGGATATCCCTCACGCTATGTCAACAACTTTACAAACAGGCAAAGAATAGGAAGGACTGCACTATTCAGATATATGAAGCTCTTTGAGCAGCTGGCCAAGGACAAAGGCATTGATATCAATGAAGAGATAGCTATTATGCAAAGAATGTTTTACTCTGATGTAATCTGGGACGAGATTGCAAAAATTGAATATGTTGACAATGACAAGCCAGTCTATGATTTAAGCGTTCCGGGACTGGAAACTTTTACAACATCTGAAGGTATTATCACCCATAATACTCTCAACGCTTTCCACCTCGCCGGCGTCCAGGAAATGCAGGTAACTCAGGGTCTGCCCCGCCTGATTGAAATATTCAACGCAAGAAAGATTCCATCTACCCCAACGATGGAAATTCATCTTGACAAGGAGAAAAACAACGAAAAAGACGCCAAGACAATAGCAGAAAAAATAAAAGAAACCATGCTCAAAGAAATAATTTTGGCGATAGAAATAAACTTTACTGACAGGGTTATAGACATAGAATCTTCATCACAAAGCTTAAGAGATGCCCACATGACTCTTGCCACTGTTGTGAAAAGACTTGAAGAAAAAGGCTACAAAGCAAGGCAGAAGGAAAGTAAAATAATAATCAAGGCAGGAGACGTGGACTTTAAGGGGCTGTACAAGCTAAAAGAGAAGCTGAAGGGAATTATCATTGCCGGAGTTGAAGGGGTTAATCAGGTTCTGGTTGTAAAGAGAGAAGCTAATTATGTTATTCTGACTTCGGGCTCAAACTTAAAAGAAGTTCTGAAAATAGACGGAGTGAGCAAGAGCAAAACGACAAGCAACAATGCAAACGAAGTAGCAGAAGTCCTCGGAATTGAAGTTGCCAGAAATGTAGTAATAAGAGAAGTAAAGAGCATACTTGAAAATCAGGGCATTGATGTAGATATAAGGCACATTGAGCTGATTGCAGACACAATGTGCGCTTCCGGAAAAGTAAAGGGAGTAACCAGAATGGGGCTGATTGCCGACAAATCATCAATCCTTGCCAAAGCTTCGTTCGAAACTCCGATAAAGCACTTCGTAAATGCCACCATCTCCGGAGCCAAGGACAAATTATCCAGCGTCGTTGAAAATATAATTCTGAACCAGCCCGTTCCTATCGGAACCGGCCTTCCAGGCCTTCTCGTGAAAGTGACCGGCTCGCTGGGCGGAGCTGGCAGCGCCGATGATAAAAAGGCGGGAAAAAAAGAAGGGAAGAAGGAAGAGTGA
PROTEIN sequence
Length: 1628
MEIIRKKIKGLRFGLLNPELIKKISSAKVVSPELYDVDGYPVDGGLMDLRLGAIDPGVKCRTCGGGLKECLGHPGSIELARPIIHIKYIQVIERFLRSICQNCGKALISEEQIKKYSSKNRIKKARDTKKCPHCNASQEKIRLEKPYNFIIGKKRLFPTEIREALAKISNEDIKLLGVDPRNFRPEWAVMSILLVPPVTVRPSITLETGERSEDDLTHKLSDIVRANQRLWENLNAGAPEVIIEDLWDLLQYHITTFFDNDVARIPPARHRSGQPLKTITERIKGKQGRIRKNLAGKRVNFSSRTVISPDPSLNINEIGIPLDVAKIITVEESVTSLNIEMMKKLVASEKYPGANYIVRPDGKKKRITSDLRQEIINELQPGYKVERHLMDGDVVLFNRHPSLHRASIMSHYVKVLPYKTFRFHPAAAFPYNADFDGDEMNIHSPQTEEARAEAIVLLDVKRNLISPKNSSNLLGCISDAVTGNYMMGNETLLKEDAMQHLYRAGIKQEFSKKTVSGIEIFKCLMPKEFSGREFKKLDNKLFGVEEGALIKELDRVTGRDRTINVLRSIFALGVSYLSRNGITISLKDLSVNEKVRESVRQVFEDSEKETNEIIELYNNGKIEQIPGKTKEESREIKILQILNSVRTKIGKVVKDEFPEDSPVSHMINSGAGGNLLNITQTSCSLGQQSLWNKRIEIGYTHRTLPFFKKHDLSPLSRGFIYSSYSKGLKPHEFFFGAITGRDSLMDLALRTPKSGYLYRRLANALQDLKVEYDGTIRDASENIVQFTYGTDGSDVSKLHLKNSKISPGEGIGIVTAQSFGEPSTQMSCRAEEKIIVKIGNKIRTAKIGEFIDMLMLKRGYHKLNNNSDVLPLHDLEVFVPSLNHEEKIEWKRVTECSRHATDKKLMKLTTASGREIICTDNHSFVTRKENKINPVKGNELHVGDRIPVMNNFFNTVPLQSISVQSYIQDENVVLDDTMLTKPGTVLKPMRNTIELNAQTGWFIGAYLAEGSGNINHVSISNLDDSYISQAKAFAGSVGLNYVENFHHRGFAESRDLKINSTLLGKFITSCCGQGADFKMVPDFAYSAPDSFVSGLLRGYFDGDGNFHVDRNMIRCSSNSRELRDNIALLLSRFKIFSFKTTDKKGQHWLLIPYKYAPLYLQNIGSDIDYKLAALKQLAERAKRFWNEQSRDYTDMISGFGELFRDTAKKVGYPSRYVNNFTNRQRIGRTALFRYMKLFEQLAKDKGIDINEEIAIMQRMFYSDVIWDEIAKIEYVDNDKPVYDLSVPGLETFTTSEGIITHNTLNAFHLAGVQEMQVTQGLPRLIEIFNARKIPSTPTMEIHLDKEKNNEKDAKTIAEKIKETMLKEIILAIEINFTDRVIDIESSSQSLRDAHMTLATVVKRLEEKGYKARQKESKIIIKAGDVDFKGLYKLKEKLKGIIIAGVEGVNQVLVVKREANYVILTSGSNLKEVLKIDGVSKSKTTSNNANEVAEVLGIEVARNVVIREVKSILENQGIDVDIRHIELIADTMCASGKVKGVTRMGLIADKSSILAKASFETPIKHFVNATISGAKDKLSSVVENIILNQPVPIGTGLPGLLVKVTGSLGGAGSADDKKAGKKEGKKEE*