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rifcsplowo2_01_scaffold_17454

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_17454_1

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comp(3..410)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FD67_9BACT
Marine sediment metagenome DNA, contig: S01H1_S25777 {ECO:0000313|EMBL:GAG36946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NUDIX hydrolase
rifcsplowo2_01_scaffold_17454_2
unknown

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comp(448..594)
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_3
AR19, Pacearchaeaota, DPANN, Archaea

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comp(594..1985)
DNA (1392bp) protein (464aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=AR19
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=5099737 bin=WS6_GWC1_33_20 species=WS6_GWC1_33_22 genus=WS6_GWC1_33_22 taxon_order=WS6_GWC1_33_22 taxon_class=WS6_GWC1_33_22 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39)
rifcsplowo2_01_scaffold_17454_4
unknown

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comp(2020..2730)
DNA (711bp) protein (237aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_5
unknown

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comp(2731..3471)
DNA (741bp) protein (247aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_6
unknown

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3627..3845
DNA (219bp) protein (73aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_7
unknown

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3849..4238
DNA (390bp) protein (130aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_8
unknown

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4274..4954
DNA (681bp) protein (227aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_9

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5014..5172
DNA (159bp) protein (53aa)
hypothetical protein
id=5044087 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54649.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_17454_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5156..5596)
DNA (441bp) protein (147aa)
PilT protein domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG95_RHOMR
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:AEN73296.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
rifcsplowo2_01_scaffold_17454_11
unknown

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comp(5593..6471)
DNA (879bp) protein (293aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17454_12

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comp(6477..6713)
DNA (237bp) protein (79aa)
Marine sediment metagenome DNA, contig: S12H4_L03704 {ECO:0000313|EMBL:GAI83448.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_17454_13
CG_Pacearch_06, Pacearchaeota, Archaea

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6817..7734
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C6874
transposase Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_17454_14
Pyrococcus sp. GI-H, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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7759..8982
DNA (1224bp) protein (408aa)
PspGI methylase id=4807157 bin=GWC2_Elusimicrobia_51_8 species=Pyrococcus sp. GI-H genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
PspGI methylase {ECO:0000313|EMBL:AAC67523.1}; TaxID=83521 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. GI-H.;"
DNA methylase N-4/N-6 domain-containing protein
rifcsplowo2_01_scaffold_17454_15

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comp(8979..9749)
DNA (771bp) protein (257aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN07057.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative glycosyl hydrolase id=3203314 bin=GWC1_Spirochaetes_27_15 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
glycosyl hydrolase
rifcsplowo2_01_scaffold_17454_16
unknown

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comp(9864..9995)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 16 items

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