ggKbase home page

rifcsplowo2_01_scaffold_37730

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_37730_1

Not on your lists

comp(171..2294)
DNA (2124bp) protein (708aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B531_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD63838.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsplowo2_01_scaffold_37730_2
unknown

Not on your lists

comp(2330..2449)
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsplowo2_01_scaffold_37730_3
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


2878..3174
DNA (297bp) protein (99aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=AR17
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5051516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e
rifcsplowo2_01_scaffold_37730_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

3171..3506
DNA (336bp) protein (112aa)
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=AR17
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_37730_5
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

3515..4072
DNA (558bp) protein (186aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07572 putative nucleotide binding protein Tax=AR17
DNA-binding protein
rifcsplowo2_01_scaffold_37730_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


4126..4617
DNA (492bp) protein (164aa)
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=AR17
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps13p; 30S ribosomal protein S13
rifcsplowo2_01_scaffold_37730_7
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


4620..5228
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ21_PYRSN
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=AR17
30S ribosomal protein S4
rifcsplowo2_01_scaffold_37730_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


5225..5653
DNA (429bp) protein (143aa)
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=AR17
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S11
rifcsplowo2_01_scaffold_37730_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

5607..6437
DNA (831bp) protein (277aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR17
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_37730_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


6573..6914
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037805E2
50S ribosomal protein L18; K02883 large subunit ribosomal protein L18e Tax=AR17
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_37730_11
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


6911..7339
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFT7_9EURY
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR17
50S ribosomal protein L13
rifcsplowo2_01_scaffold_37730_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


7336..7734
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
30S ribosomal protein S9
rifcsplowo2_01_scaffold_37730_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


7749..7946
DNA (198bp) protein (66aa)
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_04
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_37730_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

7970..8608
DNA (639bp) protein (213aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

8730..9038
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=AR17
Uncharacterized protein id=5048328 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_37730_16
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

9092..9619
DNA (528bp) protein (176aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9648..10253)
DNA (606bp) protein (202aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_18
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10246..10677)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E575F
Tax=AR17
rifcsplowo2_01_scaffold_37730_19

Not on your lists

comp(10750..11052)
DNA (303bp) protein (101aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036384A3
RNase P subunit RPR2
rifcsplowo2_01_scaffold_37730_20

Not on your lists


comp(11252..12439)
DNA (1188bp) protein (396aa)
16S rRNA (Adenine1518-N6/adenine1519-N6)-dimethyltransferase {ECO:0000313|EMBL:KHO52195.1}; EC=2.1.1.182 {ECO:0000313|EMBL:KHO52195.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW40_METFV
rifcsplowo2_01_scaffold_37730_21
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12485..14227
DNA (1743bp) protein (581aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

14228..14857
DNA (630bp) protein (210aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15093..15326
DNA (234bp) protein (78aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_24
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

15390..15692
DNA (303bp) protein (101aa)
Tax=AR17
rifcsplowo2_01_scaffold_37730_25
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15689..16171)
DNA (483bp) protein (161aa)
prolyl-tRNA synthetase Tax=AR17
hypothetical protein id=16494 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
prolyl-tRNA synthetase
rifcsplowo2_01_scaffold_37730_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

16365..16835
DNA (471bp) protein (157aa)
ychF; translation-associated GTPase; K06942 Tax=AR17
Translation-associated GTPase id=5800320 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_37730_27
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

16832..17437
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374EA2E
ychF; translation-associated GTPase; K06942 Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_37730_28
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17491..17895)
DNA (405bp) protein (135aa)
Putative NUDIX domain protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6B14 RepID=B3T8S6_9ARCH
NUDIX hydrolase Tax=AR17
NUDIX hydrolase
rifcsplowo2_01_scaffold_37730_29
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

17972..18481
DNA (510bp) protein (170aa)
Nudix 17..170 id=133491 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=AR17
rifcsplowo2_01_scaffold_37730_30
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

18514..20301
DNA (1788bp) protein (596aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=AR17
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
Displaying items 1-30 of 39 in total

View Taxonomy