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rifcsplowo2_01_scaffold_3356

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3356_1

Not on your lists

2..148
DNA (147bp) protein (49aa)
GMP reductase n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2G0I1_OCESG
Uncharacterized protein {ECO:0000313|EMBL:KKL12183.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
guanosine 5'-monophosphate oxidoreductase
rifcsplowo2_01_scaffold_3356_2
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

188..775
DNA (588bp) protein (196aa)
transmembrane_regions 133..155 Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
hypothetical protein; K08984 putative membrane protein id=5803238 bin=OD1_GWC2_34_28 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rifcsplowo2_01_scaffold_3356_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

807..1322
DNA (516bp) protein (172aa)
id=5051514 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_3356_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

1358..1840
DNA (483bp) protein (161aa)
id=5051515 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_3356_5
unknown

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1843..2484
DNA (642bp) protein (214aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3356_6
unknown

Not on your lists

comp(2462..2800)
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3356_7
unknown

Not on your lists

comp(2800..3105)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3356_8
unknown

Not on your lists

comp(3251..4036)
DNA (786bp) protein (262aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3356_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4134..4577
DNA (444bp) protein (148aa)
id=5047327 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_3356_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4598..5320
DNA (723bp) protein (241aa)
Diphthine synthase; K00586 diphthine synthase [EC:2.1.1.98] id=5047325 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Diphthine synthase; K00586 diphthine synthase [EC:2.1.1.98] Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_3356_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5306..5806)
DNA (501bp) protein (167aa)
Small-conductance mechanosensitive channel
mscs mechanosensitive ion channel id=5047323 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
mscs mechanosensitive ion channel Tax=AR18
rifcsplowo2_01_scaffold_3356_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5919..8657
DNA (2739bp) protein (913aa)
translation elongation factor aef-2; K03234 elongation factor 2 Tax=RBG_13_Pacearchaeota_36_9_curated
translation elongation factor 2; K03234 elongation factor 2 id=5051526 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Elongation factor 2
rifcsplowo2_01_scaffold_3356_13

Not on your lists

8709..10397
DNA (1689bp) protein (563aa)
Transporter, CPA2 family n=4 Tax=Methanococcus maripaludis RepID=A4FZ11_METM5 id=5103049 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KHO51750.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Transporter, CPA2 family
rifcsplowo2_01_scaffold_3356_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

10441..10824
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_3356_15
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


11018..11572
DNA (555bp) protein (185aa)
DNA-directed RNA polymerase subunit E'; K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=5049721 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit E'; K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_3356_16
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

11572..11760
DNA (189bp) protein (63aa)
DNA-directed RNA polymerase subunit E RpoE2; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5049720 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit E RpoE2; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase, subunit E
rifcsplowo2_01_scaffold_3356_17
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

11757..12038
DNA (282bp) protein (94aa)
30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e Tax=CG_Micra_03
rifcsplowo2_01_scaffold_3356_18
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

12038..12214
DNA (177bp) protein (59aa)
30S ribosomal protein S27ae n=3 Tax=Archaea RepID=K0INM2_NITGG id=5103656 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=CG_Pacearch_02
30S ribosomal protein S27ae
rifcsplowo2_01_scaffold_3356_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(12354..14903)
DNA (2550bp) protein (850aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036B69F8
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
rifcsplowo2_01_scaffold_3356_20

Not on your lists

15337..18807
DNA (3471bp) protein (1157aa)
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_3356_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18804..19400
DNA (597bp) protein (199aa)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methyltransferase small Tax=AR15
methyltransferase small
rifcsplowo2_01_scaffold_3356_22
unknown

Not on your lists

19439..20164
DNA (726bp) protein (242aa)
intracellular protein transport protein USO1 (EC:1.3.1.74 3.1.3.48)
rifcsplowo2_01_scaffold_3356_23
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20151..20462)
DNA (312bp) protein (104aa)
thioredoxin n=1 Tax=Lachnobacterium bovis RepID=UPI0003B5AB06
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
thioredoxin
rifcsplowo2_01_scaffold_3356_24
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

Not on your lists

comp(20480..21409)
DNA (930bp) protein (310aa)
cell wall biogenesis glycosyltransferase (EC:2.4.1.83)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6R7_METCZ
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKT78037.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
rifcsplowo2_01_scaffold_3356_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(21461..21982)
DNA (522bp) protein (174aa)
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e id=5050385 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=AR18
50S ribosomal protein L10e
rifcsplowo2_01_scaffold_3356_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(21979..22236)
DNA (258bp) protein (86aa)
50S ribosomal protein L35Ae n=1 Tax=sediment metagenome RepID=D9PEX7_9ZZZZ id=5103617 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L35; K02917 large subunit ribosomal protein L35Ae Tax=AR11
50S ribosomal protein L35Ae
rifcsplowo2_01_scaffold_3356_27
GWC2_Elusimicrobia_61_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22283..23674)
DNA (1392bp) protein (464aa)
methyltransferase Tax=GWC2_Elusimicrobia_61_19_curated
Fe-S oxidoreductase id=5800499 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase
rifcsplowo2_01_scaffold_3356_28
unknown

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comp(23715..24110)
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3356_29
unknown

Not on your lists

24227..24529
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 29 items

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