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rifcsplowo2_01_scaffold_12846

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12846_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1..330)
-----------------
DNA (330bp)
protein (110aa)
adenylate kinase (EC:2.7.4.3) id=5045728 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
adenylate kinase Tax=CG_Woesearch_02
Adenylate kinase
rifcsplowo2_01_scaffold_12846_2
unknown

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comp(327..767)
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_3

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comp(764..1435)
-----------------
DNA (672bp)
protein (224aa)
Uridylate kinase {ECO:0000313|EMBL:KHO55246.1}; EC=2.7.4.22 {ECO:0000313|EMBL:KHO55246.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E64D8
pyrH; uridylate kinase
rifcsplowo2_01_scaffold_12846_4
unknown

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comp(1489..1995)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_5
unknown

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comp(2084..2464)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_6
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2572..2937)
-----------------
DNA (366bp)
protein (122aa)
Glyoxalase family protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BV92_METCG
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:AEB67160.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concil
rifcsplowo2_01_scaffold_12846_7

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comp(2983..3267)
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54393.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_12846_8
unknown

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3320..3814
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_9
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

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comp(3811..4965)
-----------------
DNA (1155bp)
protein (385aa)
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] id=5044102 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Cysteine desulfurase Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
hypothetical protein
rifcsplowo2_01_scaffold_12846_10
unknown

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comp(5007..5390)
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_11

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comp(5436..6206)
-----------------
DNA (771bp)
protein (257aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXV4_METFV id=5103481 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA (pseudouridine(54)-N(1))-methyltransferase
rifcsplowo2_01_scaffold_12846_12

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comp(6154..6969)
-----------------
DNA (816bp)
protein (272aa)
cell division ATPase MinD; K03609 septum site-determining protein MinD id=5047336 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Septum site-determining protein MinD {ECO:0000313|EMBL:KHO54114.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
cell division inhibitor
rifcsplowo2_01_scaffold_12846_13
unknown

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comp(6953..7081)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_14
AR18, Woesearchaeaota, DPANN, Archaea

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comp(7045..7629)
-----------------
DNA (585bp)
protein (195aa)
id=5047331 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_12846_15
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

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comp(7679..8950)
-----------------
DNA (1272bp)
protein (424aa)
acyl-CoA synthetase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B674FF
acetyl coenzyme A synthetase (ADP forming), alpha domain protein
Tax=BJP_IG2158_OD1_28_51
rifcsplowo2_01_scaffold_12846_16
unknown

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comp(8966..10783)
-----------------
DNA (1818bp)
protein (606aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_17
CG_Woesearch_02, Woesearchaeota, Archaea

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10868..11998
-----------------
DNA (1131bp)
protein (377aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Woesearch_02
Threonine--tRNA ligase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=SYT_DESAA
thrS; threonyl-tRNA synthetase
rifcsplowo2_01_scaffold_12846_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11950..12336
-----------------
DNA (387bp)
protein (129aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Clostridium difficile CD160 RepID=T3DLB6_CLODI
thrS; threonyl-tRNA synthetase
rifcsplowo2_01_scaffold_12846_19

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12330..13769
-----------------
DNA (1440bp)
protein (480aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN27522.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
radical SAM domain-containing protein id=5043078 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
radical SAM domain-containing protein
rifcsplowo2_01_scaffold_12846_20
unknown

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comp(13806..13901)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_21
unknown

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comp(13974..14153)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12846_22
unknown

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14409..14873
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

Displaying 22 items

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