ggKbase home page

rifcsplowo2_01_scaffold_14422

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_14422_1

Not on your lists

206..484
DNA (279bp) protein (93aa)
Marine sediment metagenome DNA, contig: S03H2_L04486 {ECO:0000313|EMBL:GAH38493.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
hypothetical protein id=5240769 bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_14422_2

Not on your lists

481..828
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTB9_METAC id=5103800 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63078.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_14422_3
unknown

Not on your lists

comp(846..1211)
DNA (366bp) protein (122aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_4
unknown

Not on your lists

comp(1224..1604)
DNA (381bp) protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

1711..2421
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
3-isopropylmalate dehydratase; K06869 uncharacterized protein Tax=CG_Woesearch_01
hypothetical protein
rifcsplowo2_01_scaffold_14422_6
unknown

Not on your lists

comp(2462..3127)
DNA (666bp) protein (222aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_7
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3314..5110
DNA (1797bp) protein (599aa)
Putative uncharacterized protein Tax=GWA2_OD1_40_9
Putative uncharacterized protein id=4330649 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
rifcsplowo2_01_scaffold_14422_8
unknown

Not on your lists

5160..5501
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5517..6296)
DNA (780bp) protein (260aa)
Tax=AR11
rifcsplowo2_01_scaffold_14422_10
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

6913..7365
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C8D8_THENR
hypothetical protein; K09005 hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
rifcsplowo2_01_scaffold_14422_11
unknown

Not on your lists

7405..7722
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_12
unknown

Not on your lists

7755..8186
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8264..9001)
DNA (738bp) protein (246aa)
Putative integrase bacteriophage 370.1 n=1 Tax=Carnobacterium sp. AT7 RepID=A8U834_9LACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
resolvase, N terminal domain protein
rifcsplowo2_01_scaffold_14422_14

Not on your lists

comp(9214..9771)
DNA (558bp) protein (186aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77674.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_14422_15

Not on your lists

comp(9845..10468)
DNA (624bp) protein (208aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_14422_16
unknown

Not on your lists

10608..10883
DNA (276bp) protein (92aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14422_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

10934..11566
DNA (633bp) protein (211aa)
hypothetical protein; K07579 putative methylase Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K07579 putative methylase id=5047514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA methylase
rifcsplowo2_01_scaffold_14422_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11529..11867
DNA (339bp) protein (113aa)
RNA polymerase dimerization Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA polymerase dimerization
rifcsplowo2_01_scaffold_14422_19

Not on your lists

11962..12474
DNA (513bp) protein (171aa)
id=5050195 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44976.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_14422_20

Not on your lists

12492..13133
DNA (642bp) protein (214aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_01_scaffold_14422_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13230..14651
DNA (1422bp) protein (474aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Woesearch_02
Phosphoesterase, RecJ-like protein
rifcsplowo2_01_scaffold_14422_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14691..14960)
DNA (270bp) protein (90aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
regulatory protein MarR Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_14422_23
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

comp(15228..15839)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2ENS5_TRIVA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EAY05701.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
rifcsplowo2_01_scaffold_14422_24
unknown

Not on your lists

comp(16013..16429)
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying 24 items

View Taxonomy