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rifcsplowo2_01_scaffold_2121

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2121_1
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..332)
DNA (330bp) protein (110aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=GWC2_Deltaproteobacteria_55_46b_curated
Putative uncharacterized protein id=4191608 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
rifcsplowo2_01_scaffold_2121_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

737..3286
DNA (2550bp) protein (850aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=18248976 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=AR11
rifcsplowo2_01_scaffold_2121_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3374..3769)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
hypothetical protein Tax=AR4
putative toxin-antitoxin system toxin component, PIN family
rifcsplowo2_01_scaffold_2121_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3766..4023)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family Tax=AR11
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator, AbrB family
rifcsplowo2_01_scaffold_2121_5

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4211..4825
DNA (615bp) protein (205aa)
ATP:corrinoid adenosyltransferase, cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:KHO50752.1}; EC=2.5.1.17 {ECO:0000313|EMBL:KHO50752.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011
ATP:corrinoid adenosyltransferase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2M1_PELTS
BtuR; ATP:corrinoid adenosyltransferase
rifcsplowo2_01_scaffold_2121_6
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

4827..6704
DNA (1878bp) protein (626aa)
nrdA; ribonucleoside-diphosphate reductase alpha chain (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase alpha chain {ECO:0000313|EMBL:BAI80638.1}; EC=1.17.4.1 {ECO:0000313|EMBL:BAI80638.1};; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferrib
Ribonucleoside-diphosphate reductase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDG5_DEFDS
rifcsplowo2_01_scaffold_2121_7

Not on your lists

6728..7450
DNA (723bp) protein (241aa)
N-glycosylase/DNA lyase {ECO:0000313|EMBL:KHO51128.1}; EC=3.2.2.- {ECO:0000313|EMBL:KHO51128.1};; EC=4.2.99.18 {ECO:0000313|EMBL:KHO51128.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011
Probable N-glycosylase/DNA lyase id=5800247 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
thermostable 8-oxoguanine DNA glycosylase
rifcsplowo2_01_scaffold_2121_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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7497..8549
DNA (1053bp) protein (351aa)
Glycosyl transferase family 2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY86_METFV
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
family 2 glycosyl transferase
rifcsplowo2_01_scaffold_2121_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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8622..9281
DNA (660bp) protein (220aa)
endonuclease III (DNA-(apurinic orapyrimidinic site) lyase) (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Micrarchaeota_49_10_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5044109 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18)
rifcsplowo2_01_scaffold_2121_10
unknown

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9341..9697
DNA (357bp) protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2121_11
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9744..10172
DNA (429bp) protein (143aa)
catE; catechol-2,3-dioxygenase subunit (EC:1.13.11.2)
Putative ring-cleavage extradiol dioxygenase n=1 Tax=Halonotius sp. J07HN6 RepID=U1NE65_9EURY
Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:ERH01595.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius
rifcsplowo2_01_scaffold_2121_12
R_NC10_66_22, NC10, Bacteria

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10181..10687
DNA (507bp) protein (169aa)
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Peptidase id=3902801 bin=GWF2_Planctomycete_41_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Pfpi family intracellular protease
rifcsplowo2_01_scaffold_2121_13

Not on your lists

comp(10699..14175)
DNA (3477bp) protein (1159aa)
secreted protein
Uncharacterized protein {ECO:0000313|EMBL:CEG13573.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_2121_14
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

14349..15062
DNA (714bp) protein (238aa)
xylene monooxygenase electron transfer component Tax=GWA2_WOR_2_47_8_curated
Oxidoreductase FAD-binding domain protein id=5799967 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
xylene monooxygenase electron transfer component-like protein
rifcsplowo2_01_scaffold_2121_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

15064..15861
DNA (798bp) protein (266aa)
Fe3+-hydroxamate ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=5048739 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
periplasmic binding protein
rifcsplowo2_01_scaffold_2121_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

15868..16575
DNA (708bp) protein (236aa)
short chain dehydrogenase id=14626370 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
short chain dehydrogenase Tax=CSP1_6_Rokubacteria
short chain dehydrogenase
rifcsplowo2_01_scaffold_2121_17
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

16619..17122
DNA (504bp) protein (168aa)
Sugar transferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRN9_9BACT
Sugar transferase {ECO:0000313|EMBL:EHO40192.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
rifcsplowo2_01_scaffold_2121_18
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17096..17866)
DNA (771bp) protein (257aa)
Uncharacterized protein id=5799956 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_2121_19
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18133..18546)
DNA (414bp) protein (138aa)
Stress-responsive transcriptional regulator n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F85_METBF
Stress-responsive transcriptional regulator
Phage-shock protein {ECO:0000313|EMBL:KKH45186.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1
rifcsplowo2_01_scaffold_2121_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18555..19667)
DNA (1113bp) protein (371aa)
TPR repeat-containing protein MJ1345 Tax=AR11
rifcsplowo2_01_scaffold_2121_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19787..20290
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DA4D7
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
rifcsplowo2_01_scaffold_2121_22
R_OD1_Kaiserbacteria_54_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

20292..20480
DNA (189bp) protein (63aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_13_curated
id=4115745 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
rifcsplowo2_01_scaffold_2121_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20499..21491)
DNA (993bp) protein (331aa)
AsnC/Lrp family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
leucine-responsive regulatory protein 1; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5043670 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcriptional regulator
rifcsplowo2_01_scaffold_2121_24

Not on your lists

21610..21948
DNA (339bp) protein (113aa)
Marine sediment metagenome DNA, contig: S01H4_L02242 {ECO:0000313|EMBL:GAG66938.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_2121_25

Not on your lists

22076..22489
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003681E24
Marine sediment metagenome DNA, contig: S01H1_L05051 {ECO:0000313|EMBL:GAF74934.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_2121_26

Not on your lists

comp(22509..24962)
DNA (2454bp) protein (818aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
rifcsplowo2_01_scaffold_2121_27

Not on your lists

25213..25716
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003716170
Marine sediment metagenome DNA, contig: S03H2_C00951 {ECO:0000313|EMBL:GAH27123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_2121_28

Not on your lists

25989..26309
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL79266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thioredoxin; K03671 thioredoxin 1 id=5047485 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
thioredoxin
rifcsplowo2_01_scaffold_2121_29
unknown

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26328..26474
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2121_30
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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26477..26905
DNA (429bp) protein (143aa)
K7_Mnn4bp n=1 Tax=Saccharomyces cerevisiae (strain Kyokai no. 7 / NBRC 101557) RepID=G2WHJ2_YEASK
Mnn4p {ECO:0000313|EMBL:AJS33890.1}; TaxID=1294312 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.;" source="Sa
GDSL-family lipase/acylhydrolase
Displaying items 1-30 of 64 in total

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