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rifcsplowo2_01_scaffold_2271

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2271_1
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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162..368
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JC19_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB48817.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
rifcsplowo2_01_scaffold_2271_2

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365..622
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=5047308 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54086.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsplowo2_01_scaffold_2271_3

Not on your lists

1373..1951
DNA (579bp) protein (193aa)
Transcriptional regulator {ECO:0000313|EMBL:KHO51393.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5046753 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_2271_4

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1951..2361
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KHO51392.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_01_scaffold_2271_5
CG_Woesearch_01, Woesearchaeota, Archaea

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2378..3079
DNA (702bp) protein (234aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_2271_6
CG_Woesearch_02, Woesearchaeota, Archaea

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3080..3625
DNA (546bp) protein (182aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsplowo2_01_scaffold_2271_7

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3716..4471
DNA (756bp) protein (252aa)
GTP-binding protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YT8_METBU
Marine sediment metagenome DNA, contig: S01H1_S18708 {ECO:0000313|EMBL:GAG26248.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
GTPase YlqF
rifcsplowo2_01_scaffold_2271_8
unknown

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comp(4548..4649)
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_9
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(4619..5008)
DNA (390bp) protein (130aa)
death-on-curing family protein; K07341 death on curing protein Tax=CG_Woesearch_01
Phage protein id=5799533 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_2271_10

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comp(5097..5978)
DNA (882bp) protein (294aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00785.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
rifcsplowo2_01_scaffold_2271_11
CG_Woesearch_02, Woesearchaeota, Archaea

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6220..6948
DNA (729bp) protein (243aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=CG_Woesearch_02
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
undecaprenyl diphosphate synthase (EC:2.5.1.31)
rifcsplowo2_01_scaffold_2271_12
unknown

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comp(6965..7483)
DNA (519bp) protein (173aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


7747..8100
DNA (354bp) protein (118aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=CG_Woesearch_02
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5043963 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L7Ae
rifcsplowo2_01_scaffold_2271_14
CG_Woesearch_02, Woesearchaeota, Archaea

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8103..8423
DNA (321bp) protein (107aa)
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=CG_Woesearch_02
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e id=5043962 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S28e
rifcsplowo2_01_scaffold_2271_15

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8423..8608
DNA (186bp) protein (62aa)
50S ribosomal protein L24e {ECO:0000313|EMBL:KHO52668.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L24E
rifcsplowo2_01_scaffold_2271_16
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

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8583..9110
DNA (528bp) protein (176aa)
nucleoside diphosphate kinase ; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000375701A
nucleoside diphosphate kinase
rifcsplowo2_01_scaffold_2271_17

Not on your lists

9112..11286
DNA (2175bp) protein (725aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5043960 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 2
rifcsplowo2_01_scaffold_2271_18

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11367..12653
DNA (1287bp) protein (429aa)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
rifcsplowo2_01_scaffold_2271_19

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12732..13040
DNA (309bp) protein (103aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 id=5043958 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rps10p; 30S ribosomal protein S10
rifcsplowo2_01_scaffold_2271_20
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

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13363..13575
DNA (213bp) protein (71aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
rifcsplowo2_01_scaffold_2271_21
unknown

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13864..14523
DNA (660bp) protein (220aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_22
unknown

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14639..14908
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_23
unknown

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comp(15285..15596)
DNA (312bp) protein (104aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_24
unknown

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15881..16750
DNA (870bp) protein (290aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_25
unknown

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16698..17015
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2271_26
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(17200..17610)
DNA (411bp) protein (137aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
Hit-like protein involved in cell-cycle regulation
Histidine triad (HIT) protein id=5800533 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_2271_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(17613..18440)
DNA (828bp) protein (276aa)
Calcineurin-like phosphoesterase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LW95_SYNAS
calcineurin-like phosphoesterase Tax=AR11
calcineurin-like phosphoesterase
rifcsplowo2_01_scaffold_2271_28
AR18, Woesearchaeaota, DPANN, Archaea

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comp(18430..18843)
DNA (414bp) protein (138aa)
id=5049518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_2271_29

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comp(18845..19330)
DNA (486bp) protein (162aa)
hypothetical protein
hypothetical protein id=5049517 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53853.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_2271_30

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comp(19432..19845)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y126_9CLOT
Marine sediment metagenome DNA, contig: S01H1_S34119 {ECO:0000313|EMBL:GAG28504.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Displaying items 1-30 of 41 in total

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