ggKbase home page

rifcsplowo2_01_scaffold_4861

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4861_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..453)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B8932
acetyltransferase-like protein
Acetyltransferase-like protein {ECO:0000313|EMBL:ACV10486.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
rifcsplowo2_01_scaffold_4861_2
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(491..1111)
DNA (621bp) protein (207aa)
hypothetical protein id=14624238 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=candidate division DUSEL4 tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
hypothetical protein
rifcsplowo2_01_scaffold_4861_3
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(1126..1473)
DNA (348bp) protein (116aa)
hypothetical protein Tax=GWA2_OD1_31_28_partial
rifcsplowo2_01_scaffold_4861_4
unknown

Not on your lists

comp(1547..1648)
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4861_5

Not on your lists

comp(1650..2075)
DNA (426bp) protein (142aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=5044055 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DUTP pyrophosphatase {ECO:0000313|EMBL:KHO46898.1}; EC=3.6.1.23 {ECO:0000313|EMBL:KHO46898.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
rifcsplowo2_01_scaffold_4861_6
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(2173..2676)
DNA (504bp) protein (168aa)
hypothetical protein Tax=GWA2_OD1_31_28_partial
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_4861_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

2730..3704
DNA (975bp) protein (325aa)
tRNA-modifying enzyme id=5800386 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA-modifying enzyme Tax=AR15
wyosine base formation domain-containing protein
rifcsplowo2_01_scaffold_4861_8
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(3699..4301)
DNA (603bp) protein (201aa)
metallophosphoesterase; K07096 Tax=CG_Woesearch_03
metallophosphoesterase; K07096 id=5050977 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Metallophosphoesterase
rifcsplowo2_01_scaffold_4861_9
unknown

Not on your lists

4436..4888
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4861_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(4885..6108)
DNA (1224bp) protein (408aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain id=5049183 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld
rifcsplowo2_01_scaffold_4861_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(6059..7000)
DNA (942bp) protein (314aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=5049182 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_4861_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7060..7644)
DNA (585bp) protein (195aa)
phosphatidate cytidylyltransferase Tax=CG_Woesearch_02
hypothetical protein id=5046911 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_4861_13

Not on your lists

comp(7641..8225)
DNA (585bp) protein (195aa)
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:KHO49506.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein id=5093316 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
PA-phosphatase like phosphoesterase
rifcsplowo2_01_scaffold_4861_14
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8239..9270)
DNA (1032bp) protein (344aa)
Glucose-1-phosphate thymidylyltransferase id=4749385 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KHE93530.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Sca
Glucosamine-1-phosphate N-acetyltransferase
rifcsplowo2_01_scaffold_4861_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(9275..10516)
DNA (1242bp) protein (414aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_4861_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10612..11817
DNA (1206bp) protein (402aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKE2_9EURY
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A Tax=CG_Woesearch_02
NhaP-type potassium/proton antiporter
rifcsplowo2_01_scaffold_4861_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11807..14263)
DNA (2457bp) protein (819aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=AR11
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5048384 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA gyrase, A subunit
rifcsplowo2_01_scaffold_4861_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14450..15094
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D7B0_9BACT
hypothetical protein; K06966 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_4861_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15096..15239)
DNA (144bp) protein (48aa)
hypothetical protein Tax=AR11
rifcsplowo2_01_scaffold_4861_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15319..16389)
DNA (1071bp) protein (357aa)
Chromosome segregation and condensation protein, ScpB Tax=AR11
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
rifcsplowo2_01_scaffold_4861_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16391..16975)
DNA (585bp) protein (195aa)
hypothetical protein
hypothetical protein Tax=AR11
Putative uncharacterized protein id=5048378 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4861_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

17071..17712
DNA (642bp) protein (214aa)
Putative phosphate transport regulator n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TIJ0_CALNY
Uncharacterized protein Tax=AR11
phosphate transport regulator
rifcsplowo2_01_scaffold_4861_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17705..18703
DNA (999bp) protein (333aa)
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family id=14627387 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=CSP1_6_Rokubacteria
pit; low-affinity inorganic phosphate transporter
rifcsplowo2_01_scaffold_4861_24
unknown

Not on your lists

comp(18719..19429)
DNA (711bp) protein (237aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4861_25

Not on your lists

comp(19506..20378)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YTW3_MELRP id=5103290 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_L00143 {ECO:0000313|EMBL:GAI04689.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 25 items

View Taxonomy