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rifcsplowo2_01_scaffold_10222

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10222_1
unknown

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31..552
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10222_2

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555..1751
DNA (1197bp) protein (399aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMD4_SEBTE rbh
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dihydroorotase
rifcsplowo2_01_scaffold_10222_3
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

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1744..2370
DNA (627bp) protein (209aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KKW16468.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Orotate phosphoribosyltransferase id=5799619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_10222_4
AR11, Woesearchaeaota, DPANN, Archaea

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2480..3184
DNA (705bp) protein (235aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=AR11
rifcsplowo2_01_scaffold_10222_5
AR15, Woesearchaeaota, DPANN, Archaea

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3234..3554
DNA (321bp) protein (107aa)
transmembrane_regions id=5799577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transmembrane_regions Tax=AR15
rifcsplowo2_01_scaffold_10222_6
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

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3574..4167
DNA (594bp) protein (198aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
hypothetical protein id=14425722 bin=bin1_lowGC species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
metal dependent hydrolase
rifcsplowo2_01_scaffold_10222_7

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4217..4741
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57798.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_10222_8
AR11, Woesearchaeaota, DPANN, Archaea

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4854..6047
DNA (1194bp) protein (398aa)
Methylase Tax=AR11
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_10222_9
unknown

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6050..6496
DNA (447bp) protein (149aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10222_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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6616..7914
DNA (1299bp) protein (433aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_13_Pacearchaeota_33_26_curated
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cysteine methyltransferase
rifcsplowo2_01_scaffold_10222_11
unknown

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comp(7873..8286)
DNA (414bp) protein (138aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10222_12
unknown

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comp(8298..8729)
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10222_13

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comp(8802..10079)
DNA (1278bp) protein (426aa)
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transcription initiation factor IIB
rifcsplowo2_01_scaffold_10222_14
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

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comp(10393..12015)
DNA (1623bp) protein (541aa)
seg id=5800583 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
rifcsplowo2_01_scaffold_10222_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12021..13505)
DNA (1485bp) protein (495aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Woesearch_02
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AMP phosphohydrolase
Displaying 15 items

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