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rifcsplowo2_01_scaffold_7754

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7754_1
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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3..215
DNA (213bp) protein (71aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=GWF2_Bacteroidetes_35_48_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2U2_9BACT
rifcsplowo2_01_scaffold_7754_2

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comp(189..1100)
DNA (912bp) protein (304aa)
Marine sediment metagenome DNA, contig: S12H4_S11337 {ECO:0000313|EMBL:GAJ11770.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_7754_3
unknown

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1362..1523
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7754_4
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1553..1954)
DNA (402bp) protein (134aa)
PilT protein domain protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EA35_9FIRM
PilT protein domain protein {ECO:0000313|EMBL:CCO08448.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothe
PilT protein domain-containing protein
rifcsplowo2_01_scaffold_7754_5

Not on your lists

comp(1947..2225)
DNA (279bp) protein (93aa)
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SpoVT/AbrB family transcription regulator {ECO:0000313|EMBL:KHO46003.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator, AbrB family
rifcsplowo2_01_scaffold_7754_6

Not on your lists

comp(2439..4790)
DNA (2352bp) protein (784aa)
Helicase, Snf2 family protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5TUK9_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KHO49076.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
SNF2 family helicase
rifcsplowo2_01_scaffold_7754_7
AR6, Pacearchaeaota, DPANN, Archaea

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comp(4778..6160)
DNA (1383bp) protein (461aa)
Helix-turn-helix protein (Fragment) n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NGN4_9EURY
Putative uncharacterized protein Tax=AR6
rifcsplowo2_01_scaffold_7754_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6182..6637)
DNA (456bp) protein (152aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative 3-methyladenine DNA glycosylase id=2773084 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rifcsplowo2_01_scaffold_7754_9
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6796..8004)
DNA (1209bp) protein (403aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=CG_Woesearch_01
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5049197 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
methionine adenosyltransferase (EC:2.5.1.6)
rifcsplowo2_01_scaffold_7754_10

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8114..8659
DNA (546bp) protein (182aa)
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO51376.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein id=5049192 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative transcription regulator, containing CBS protein
rifcsplowo2_01_scaffold_7754_11
unknown

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8723..9625
DNA (903bp) protein (301aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7754_12
AR11, Woesearchaeaota, DPANN, Archaea

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comp(9629..10477)
DNA (849bp) protein (283aa)
phosphoesterase; K06953 Tax=AR11
phosphoesterase; K06953 id=5049191 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_7754_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10543..10899)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ
Putative uncharacterized protein Tax=AR11
rifcsplowo2_01_scaffold_7754_14
nanoarchaeote Nst1, Nanoarchaeota, Archaea

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11059..11532
DNA (474bp) protein (158aa)
Putative transcriptional regulator, contains HTH and 4VR domain n=1 Tax=nanoarchaeote Nst1 RepID=R1FUG7_9ARCH
Putative transcriptional regulator, contains HTH and 4VR domain {ECO:0000313|EMBL:EOD42755.1}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
PAS/PAC sensor signal transduction histidine kinase
rifcsplowo2_01_scaffold_7754_15
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11686..12003
DNA (318bp) protein (106aa)
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain {ECO:0000313|EMBL:ETA68913.1}; EC=3.1.1.- {ECO:0000313|EMBL:ETA68913.1};; TaxID=1090322 species="Archaea; Euryarchaeot
UPI0003D1B02C related cluster n=1 Tax=unknown RepID=UPI0003D1B02C
Ser-tRNA(Ala) deacylase
rifcsplowo2_01_scaffold_7754_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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12011..12337
DNA (327bp) protein (109aa)
Threonyl/alanyl tRNA synthetase SAD id=4688822 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
threonyl/alanyl tRNA synthetase
Threonyl/alanyl tRNA synthetase {ECO:0000313|EMBL:BAJ47133.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
rifcsplowo2_01_scaffold_7754_17
CG_Woesearch_01, Woesearchaeota, Archaea

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12339..13370
DNA (1032bp) protein (344aa)
glycoside hydrolase 15-like protein; K07190 phosphorylase kinase alpha/beta subunit Tax=CG_Woesearch_01
glycoside hydrolase 15-like protein; K07190 phosphorylase kinase alpha/beta subunit id=5044577 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glycosyl hydrolases 15 family protein
rifcsplowo2_01_scaffold_7754_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13345..15273)
DNA (1929bp) protein (643aa)
Amylo-alpha-1,6-glucosidase Tax=CG_Woesearch_02
Amylo-alpha-1,6-glucosidase id=5043633 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_7754_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15310..17094)
DNA (1785bp) protein (595aa)
glycogen (starch) synthase; K00693 glycogen(starch) synthase [EC:2.4.1.11] id=5044173 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glycosyltransferase Tax=CG_Woesearch_02
glycosyltransferase
rifcsplowo2_01_scaffold_7754_20
AR18, Woesearchaeaota, DPANN, Archaea

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17553..17873
DNA (321bp) protein (107aa)
id=5047331 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_7754_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17878..19065
DNA (1188bp) protein (396aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] id=5043627 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyltransferase (EC:2.4.1.21)
glycosyltransferase Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_7754_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

19091..20299
DNA (1209bp) protein (403aa)
alpha-amylase (EC:3.2.1.1) id=5043626 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative alpha-amylase (EC:3.2.1.1)
Alpha-amylase Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_7754_23
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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20315..20632
DNA (318bp) protein (106aa)
seg 2..18 Tax=RBG_13_Chloroflexi_46_9_curated
seg 2..18 id=1241391 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
rifcsplowo2_01_scaffold_7754_24
CG_Woesearch_02, Woesearchaeota, Archaea

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20645..20941
DNA (297bp) protein (99aa)
id=5044174 Tax=CG_Woesearch_02
hypothetical protein id=1241140 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
rifcsplowo2_01_scaffold_7754_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21002..21205
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
rifcsplowo2_01_scaffold_7754_26

Not on your lists

21210..21437
DNA (228bp) protein (76aa)
ribosomal protein S17E
30S ribosomal protein S17e id=5800746 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_7754_27
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21430..21906)
DNA (477bp) protein (159aa)
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S326_THEOJ
rifcsplowo2_01_scaffold_7754_28
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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22035..23750
DNA (1716bp) protein (572aa)
ilvD; dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2W7_9PLAN
rifcsplowo2_01_scaffold_7754_29

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comp(23763..24335)
DNA (573bp) protein (191aa)
coaE; dephosphocoenzyme A kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=2 Tax=Clostridium difficile RepID=T3JL09_CLODI
Dephospho-CoA kinase {ECO:0000313|EMBL:KHO52869.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_01_scaffold_7754_30
unknown

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comp(24350..24508)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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