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rifcsplowo2_01_scaffold_16738

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16738_1
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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comp(1..639)
DNA (639bp) protein (213aa)
zinc/iron permease Tax=RBG_13_OP11_40_15_curated
zinc/iron permease id=5097710 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
zinc/iron permease
rifcsplowo2_01_scaffold_16738_2
AR4, Woesearchaeaota, DPANN, Archaea

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comp(668..1399)
DNA (732bp) protein (244aa)
transcriptional regulator TrmB id=5048633 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator TrmB Tax=AR4
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_16738_3
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

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1498..2580
DNA (1083bp) protein (361aa)
hisC; histidinol-phosphate transaminase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
Histidinol-phosphate aminotransferase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZ63_FERPA
histidinol-phosphate aminotransferase
rifcsplowo2_01_scaffold_16738_4
R_WWE3_37_15, WWE3, Bacteria

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comp(2586..3398)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI02_9EURY
carboxymethylenebutenolidase Tax=RIFCSPLOWO2_01_FULL_WWE3_37_15_curated
putative dienelactone hydrolase family
rifcsplowo2_01_scaffold_16738_5

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comp(3473..4435)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379B0D2
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AJF61425.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
UBA/THiF-type NAD/FAD binding protein
rifcsplowo2_01_scaffold_16738_6
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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4537..5151
DNA (615bp) protein (205aa)
transmembrane_regions 133..155 Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
transmembrane_regions 133..155 id=53589 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsplowo2_01_scaffold_16738_7
unknown

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5420..5521
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16738_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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5935..7293
DNA (1359bp) protein (453aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Micrarchaeota_49_10_curated
Cysteinyl-tRNA ligase id=3544258 bin=GWA1_ZB2_49_26 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
cysS; cysteinyl-tRNA synthetase CysS
rifcsplowo2_01_scaffold_16738_9
unknown

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7278..7826
DNA (549bp) protein (183aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16738_10

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comp(7886..10246)
DNA (2361bp) protein (787aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5048462 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1579365 species="Archaea.;" source=
Valine-tRNA ligase
Displaying 10 items

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