ggKbase home page

rifcsplowo2_01_scaffold_11574

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11574_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

90..1568
DNA (1479bp) protein (493aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Euryarchaeota_68_13_curated
Cystathionine beta-synthase n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SK43_9BACT
cystathionine beta-synthase
rifcsplowo2_01_scaffold_11574_2
unknown

Not on your lists

comp(1565..2398)
DNA (834bp) protein (278aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11574_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2766..3665)
DNA (900bp) protein (300aa)
hypothetical protein Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_11574_4

Not on your lists

3942..4904
DNA (963bp) protein (321aa)
putative anaerobic sulfite reductase, A subunit id=5048728 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45391.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
FAD and NAD-binding oxidoreductase
rifcsplowo2_01_scaffold_11574_5

Not on your lists

4901..5698
DNA (798bp) protein (266aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein id=5048727 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:KHO45390.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
oxidoreductase FAD/NAD(P)-binding domain protein
rifcsplowo2_01_scaffold_11574_6

Not on your lists

5691..6464
DNA (774bp) protein (258aa)
sulfhydrogenase subunit delta id=5048726 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Sulfhydrogenase subunit delta {ECO:0000313|EMBL:KHO45389.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hydrogenase
rifcsplowo2_01_scaffold_11574_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

6442..7716
DNA (1275bp) protein (425aa)
nickel-dependent hydrogenase large subunit Tax=CG_Woesearch_03
nickel-dependent hydrogenase id=5048725 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
nickel-dependent hydrogenase
rifcsplowo2_01_scaffold_11574_8
unknown

Not on your lists

7713..7811
DNA (99bp) protein (33aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11574_9
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

7808..8167
DNA (360bp) protein (120aa)
hypothetical protein
id=5048723 Tax=CG_Woesearch_03
seg id=5240633 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_11574_10
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

8146..9030
DNA (885bp) protein (295aa)
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein id=5048722 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_11574_11
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

9027..9731
DNA (705bp) protein (235aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CAF1_9ZZZZ
Uncharacterized protein Tax=CG_Woesearch_03
hypothetical protein
rifcsplowo2_01_scaffold_11574_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9717..9935)
DNA (219bp) protein (73aa)
id=5048720 Tax=CG_Woesearch_03
id=5048720 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_11574_13
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9935..10255)
DNA (321bp) protein (107aa)
id=5048719 Tax=CG_Woesearch_03
id=5048719 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_11574_14

Not on your lists

comp(10255..11259)
DNA (1005bp) protein (335aa)
Uncharacterized protein id=5800423 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61754.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsplowo2_01_scaffold_11574_15

Not on your lists

comp(11256..12575)
DNA (1320bp) protein (440aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Adenylosuccinate lyase {ECO:0000313|EMBL:KHO46482.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KHO46482.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
adenylosuccinate lyase
rifcsplowo2_01_scaffold_11574_16
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(12609..13385)
DNA (777bp) protein (259aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=GWF2_WOR_2_43_52_curated
Inositol-1-monophosphatase id=3833419 bin=GWF2_OP3_43_52 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
inositol monophosphatase
rifcsplowo2_01_scaffold_11574_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13382..14317)
DNA (936bp) protein (312aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFZ6_ANAD2
rifcsplowo2_01_scaffold_11574_18
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

comp(14329..14775)
DNA (447bp) protein (149aa)
NUDIX hydrolase Tax=RBG_19FT_COMBO_OP11_43_10_curated
NUDIX family hydrolase id=4759203 bin=PER_GWC2_41_7 species=Pseudomonas sp. M47T1 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
NUDIX hydrolase
rifcsplowo2_01_scaffold_11574_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14772..15587)
DNA (816bp) protein (272aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (EC:5.4.99.18); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=AR11
purE; putative phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5045875 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
rifcsplowo2_01_scaffold_11574_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16093..17064
DNA (972bp) protein (324aa)
AsnC family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
AsnC/Lrp family transcriptional regulator id=24450671 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_11574_21
unknown

Not on your lists

comp(17216..17512)
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11574_22
GWA2_OD1_44_12, Parcubacteria, Bacteria

Not on your lists

17565..18884
DNA (1320bp) protein (440aa)
Glutamate-cysteine ligase family 2(GCS2)
Glutamate-cysteine ligase family 2 {ECO:0000313|EMBL:KKT35519.1}; TaxID=1618829 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_12.;"
Uncharacterized protein id=5049175 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_11574_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18876..20591)
DNA (1716bp) protein (572aa)
CTP synthase; K01937 CTP synthase [EC:6.3.4.2] Tax=AR11
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
rifcsplowo2_01_scaffold_11574_24
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(20588..23758)
DNA (3171bp) protein (1057aa)
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_13_Euryarchaeota_31_8_curated
Carbamoyl-phosphate synthase, large subunit id=2471704 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
carB; carbamoylphosphate synthase large subunit
rifcsplowo2_01_scaffold_11574_25
R_OD1_Kaiserbacteria_54_11b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(23755..24846)
DNA (1092bp) protein (364aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5046264 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_11b_curated
carbamoyl phosphate synthase small subunit
Displaying 25 items

View Taxonomy