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rifcsplowo2_01_scaffold_38463

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_38463_1
unknown

Not on your lists

comp(2..838)
DNA (837bp) protein (279aa)

This feature has no annotations

rifcsplowo2_01_scaffold_38463_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(890..2572)
DNA (1683bp) protein (561aa)
hypothetical protein Tax=CG_Woesearch_02
Histone acetyltransferase Elp3 like protein id=5800668 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histone acetyltransferase Elp3 like protein
rifcsplowo2_01_scaffold_38463_3
unknown

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comp(2595..2765)
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsplowo2_01_scaffold_38463_4

Not on your lists

comp(2769..3068)
DNA (300bp) protein (100aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46570.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_38463_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3065..3235)
DNA (171bp) protein (57aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR11
rifcsplowo2_01_scaffold_38463_6
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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3396..4493
DNA (1098bp) protein (366aa)
Putative protein methyltransferase MJ0928 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y928_METJA
Putative protein methyltransferase MJ0928; M.MjaHemkP; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococ
Methylase of polypeptide chain release factors
rifcsplowo2_01_scaffold_38463_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(4501..5259)
DNA (759bp) protein (253aa)
transcriptional regulator TrmB Tax=AR19
transcriptional regulator TrmB id=5047425 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_38463_8
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5348..5938
DNA (591bp) protein (197aa)
hypothetical protein; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036B007A
rifcsplowo2_01_scaffold_38463_9
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

6090..6938
DNA (849bp) protein (283aa)
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein; K09716 hypothetical protein Tax=CG_Woesearch_03
Hypothetical protein
rifcsplowo2_01_scaffold_38463_10
unknown

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6967..7560
DNA (594bp) protein (198aa)

This feature has no annotations

rifcsplowo2_01_scaffold_38463_11

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comp(7557..8276)
DNA (720bp) protein (240aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L11 {ECO:0000313|EMBL:KHO46636.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L11
rifcsplowo2_01_scaffold_38463_12

Not on your lists


comp(8408..8932)
DNA (525bp) protein (175aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_38463_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8929..9117)
DNA (189bp) protein (63aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=CG_Woesearch_02
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Preprotein translocase subunit secE
rifcsplowo2_01_scaffold_38463_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9114..10214)
DNA (1101bp) protein (367aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR11
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsplowo2_01_scaffold_38463_15

Not on your lists

comp(10247..10933)
DNA (687bp) protein (229aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_38463_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(11020..12135)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ABDB0
hypothetical protein Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_38463_17
unknown

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comp(12191..13348)
DNA (1158bp) protein (386aa)

This feature has no annotations

rifcsplowo2_01_scaffold_38463_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13394..13933)
DNA (540bp) protein (180aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=CG_Woesearch_02
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=5046594 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cytidylate kinase
rifcsplowo2_01_scaffold_38463_19
unknown

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comp(14064..14849)
DNA (786bp) protein (262aa)

This feature has no annotations

Displaying 19 items

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