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rifcsplowo2_01_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_391_1

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comp(141..1037)
DNA (897bp) protein (299aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] id=5045701 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000313|EMBL:KHO51823.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_01_scaffold_391_2

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1135..1830
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
Uncharacterized protein {ECO:0000313|EMBL:KHO51821.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_391_3
AR11, Woesearchaeaota, DPANN, Archaea

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1869..2249
DNA (381bp) protein (127aa)
Putative uncharacterized protein Tax=AR11
rifcsplowo2_01_scaffold_391_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2305..2712
DNA (408bp) protein (136aa)
hypothetical protein
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_391_5
unknown

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2967..3866
DNA (900bp) protein (300aa)

This feature has no annotations

rifcsplowo2_01_scaffold_391_6
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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4007..4639
DNA (633bp) protein (211aa)
MarR family transcriptional regulator (EC:2.7.1.161); K07732 riboflavin kinase, archaea type [EC:2.7.1.161] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
riboflavin kinase, archaea type (EC:2.7.1.161)
riboflavin/FAD biosynthesis transcriptional regulator (EC:2.7.1.161); K07732 riboflavin kinase, archaea type [EC:2.7.1.161] id=5241330 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_391_7
AR11, Woesearchaeaota, DPANN, Archaea

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4636..5103
DNA (468bp) protein (156aa)
riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=AR11
riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7F7_METTP
rifcsplowo2_01_scaffold_391_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5100..5513
DNA (414bp) protein (138aa)
ribH; riboflavin synthase subunit beta (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI9_NITGG
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
rifcsplowo2_01_scaffold_391_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5516..6157
DNA (642bp) protein (214aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Geobacter sp. (strain M18) RepID=E8WHQ2_GEOS8
3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobact
rifcsplowo2_01_scaffold_391_10
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6154..7227
DNA (1074bp) protein (358aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Paenibacillus lactis 154 RepID=G4HF41_9BACL rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 1
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase
rifcsplowo2_01_scaffold_391_11
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7249..9144)
DNA (1896bp) protein (632aa)
Putative acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9W3_9DELT
carboxyl transferase
Tax=BJP_IG2069_Desfulfarculales_53_13
rifcsplowo2_01_scaffold_391_12
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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9343..10104
DNA (762bp) protein (254aa)
zinc/iron permease id=5097710 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
Zinc/iron permease {ECO:0000313|EMBL:KKT02990.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
zinc/iron permease
rifcsplowo2_01_scaffold_391_13
CG_Woesearch_02, Woesearchaeota, Archaea

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10209..12092
DNA (1884bp) protein (628aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5047130 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Minimal nucleotidyltransferase fused to HEPN protein
rifcsplowo2_01_scaffold_391_14
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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12211..13512
DNA (1302bp) protein (434aa)
phosphofructokinase, pyrophosphate dependent (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=GWF2_Bacteroidetes_33_38_curated
Pyrophosphate-dependent phosphofructokinase id=4122571 bin=GWF2_Bacteroidetes_33_38 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
phosphofructokinase
rifcsplowo2_01_scaffold_391_15

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13621..14154
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51282.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
seg id=5042273 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_391_16
CG_Woesearch_02, Woesearchaeota, Archaea

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14205..14705
DNA (501bp) protein (167aa)
hypothetical protein
id=5041691 Tax=CG_Woesearch_02
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_391_17
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(14884..15666)
DNA (783bp) protein (261aa)
hypothetical protein Tax=CG_Woesearch_03
rifcsplowo2_01_scaffold_391_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(15938..16144)
DNA (207bp) protein (69aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_391_19
unknown

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comp(16211..16942)
DNA (732bp) protein (244aa)

This feature has no annotations

rifcsplowo2_01_scaffold_391_20
Aphanizomenon sp. NH-5, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

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17596..18327
DNA (732bp) protein (244aa)
SxtU n=1 Tax=Aphanizomenon sp. NH-5 RepID=C3RVM1_9NOST
SxtU {ECO:0000313|EMBL:ACG63811.1}; TaxID=190592 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon sp. NH-5.;"
short-chain dehydrogenase/reductase SDR
rifcsplowo2_01_scaffold_391_21
unknown

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18438..19817
DNA (1380bp) protein (460aa)

This feature has no annotations

rifcsplowo2_01_scaffold_391_22
unknown

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20065..20739
DNA (675bp) protein (225aa)

This feature has no annotations

rifcsplowo2_01_scaffold_391_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(20743..21342)
DNA (600bp) protein (200aa)
Nitroreductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4C9_HALXS
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEH38669.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JC
rifcsplowo2_01_scaffold_391_24

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comp(21439..21846)
DNA (408bp) protein (136aa)
Putative uncharacterized protein id=5800008 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61339.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_391_25

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comp(21846..22055)
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50944.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_391_26
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(22087..23952)
DNA (1866bp) protein (622aa)
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_13_Woesearchaeota_36_6_curated
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] id=5044155 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Histone acetyltransferase Elp3 like protein
rifcsplowo2_01_scaffold_391_27
AR4, Woesearchaeaota, DPANN, Archaea

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23976..24341
DNA (366bp) protein (122aa)
response regulator receiver protein id=5045992 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
response regulator receiver protein Tax=AR4
response regulator receiver protein
rifcsplowo2_01_scaffold_391_28

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24387..25880
DNA (1494bp) protein (498aa)
signal transduction histidine kinase LytS id=5045991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:KHO45801.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
integral membrane sensor signal transduction histidine kinase
rifcsplowo2_01_scaffold_391_29
unknown

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25968..27788
DNA (1821bp) protein (607aa)

This feature has no annotations

rifcsplowo2_01_scaffold_391_30
unknown

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27823..29127
DNA (1305bp) protein (435aa)

This feature has no annotations

Displaying items 1-30 of 86 in total

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