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rifcsplowo2_01_scaffold_6400

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6400_1
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(2..319)
DNA (318bp) protein (106aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR9
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_6400_2

Not on your lists


comp(344..643)
DNA (300bp) protein (100aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_6400_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(692..1480)
DNA (789bp) protein (263aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR9
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_6400_4

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comp(1483..1926)
DNA (444bp) protein (148aa)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsplowo2_01_scaffold_6400_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(1931..2578)
DNA (648bp) protein (216aa)
rps4p; 30S ribosomal protein S4P; K02986 small subunit ribosomal protein S4 Tax=AR9
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4
rifcsplowo2_01_scaffold_6400_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(2656..3156)
DNA (501bp) protein (167aa)
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=AR9
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps13p; 30S ribosomal protein S13
rifcsplowo2_01_scaffold_6400_7
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

3314..3697
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29980_ARCFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAB90974.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
rifcsplowo2_01_scaffold_6400_8
AR4, Woesearchaeaota, DPANN, Archaea

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3694..4092
DNA (399bp) protein (133aa)
hypothetical protein id=5045321 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_6400_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4152..5621)
DNA (1470bp) protein (490aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR9
hypothetical protein; K00992 [EC:2.7.7.-] id=5050202 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_6400_10
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5694..7373
DNA (1680bp) protein (560aa)
DNA mismatch repair protein MutS n=1 Tax=Azoarcus sp. KH32C RepID=H0Q3K6_9RHOO
mutS; DNA mismatch repair protein
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Az
rifcsplowo2_01_scaffold_6400_11

Not on your lists

comp(7406..8014)
DNA (609bp) protein (203aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=5799878 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61209.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
HAD-superfamily hydrolase
rifcsplowo2_01_scaffold_6400_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8074..8343)
DNA (270bp) protein (90aa)
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=AR9
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5044918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_6400_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8573..9283)
DNA (711bp) protein (237aa)
Putative hydrolase (HAD superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1T2_UNCMA
HAD family hydrolase Tax=CG_Woesearch_02
HAD family hydrolase
rifcsplowo2_01_scaffold_6400_14
unknown

Not on your lists

9374..9727
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_15
unknown

Not on your lists

comp(9893..10690)
DNA (798bp) protein (266aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_16
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(10838..11155)
DNA (318bp) protein (106aa)
Gp20 Tax=CG_Pacearch_01
Gp20 id=4677109 bin=GWA2_OP3_52_12 species=Phage phiJL001 genus=Yualikevirus taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rifcsplowo2_01_scaffold_6400_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

11403..12881
DNA (1479bp) protein (493aa)
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=AR9
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHF3_9DELT
rifcsplowo2_01_scaffold_6400_18
unknown

Not on your lists

12914..13795
DNA (882bp) protein (294aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13835..14203)
DNA (369bp) protein (123aa)
Tax=AR9
rifcsplowo2_01_scaffold_6400_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

14460..15170
DNA (711bp) protein (237aa)
hypothetical protein; K06869 uncharacterized protein Tax=AR9
hypothetical protein; K06869 uncharacterized protein id=5041645 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_6400_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15378..16154)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382DD02
putative bacteriophage 370.1 integrase Tax=CG_Woesearch_02
resolvase, N terminal domain protein
rifcsplowo2_01_scaffold_6400_22
unknown

Not on your lists

comp(16427..16948)
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_23
R_OD1_Kaiserbacteria_51_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

17228..17488
DNA (261bp) protein (87aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Kaiserbacteria_51_13_curated
rifcsplowo2_01_scaffold_6400_24
unknown

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17490..17777
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_25
unknown

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comp(17790..18170)
DNA (381bp) protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_26
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

comp(18274..18762)
DNA (489bp) protein (163aa)
hypothetical protein
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
Putative uncharacterized protein id=5241273 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_6400_27
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18868..19470)
DNA (603bp) protein (201aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobact
Superoxide dismutase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A6K6_DESDJ
superoxide dismutase
rifcsplowo2_01_scaffold_6400_28
Bacillus cytotoxicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19543..20169
DNA (627bp) protein (209aa)
bifunctional methionine sulfoxide reductase A/B (EC:1.8.4.11)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ABS24138.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ABS24138.1};; TaxID=315749 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Baci
Methionine-R-sulfoxide reductase n=1 Tax=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) RepID=A7GVI0_BACCN
rifcsplowo2_01_scaffold_6400_29
unknown

Not on your lists

comp(20325..20810)
DNA (486bp) protein (162aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6400_30
R_RIF_OP11_01_43_15b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

comp(21212..21328)
DNA (117bp) protein (39aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00037E79FC
pyrophosphatase Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_01_43_15b_curated
pyrophosphatase
Displaying items 1-30 of 49 in total

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