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rifcsplowo2_01_scaffold_6488

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6488_1

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2..1198
DNA (1197bp) protein (399aa)
Oxidative cyclase id=5800341 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Oxidative cyclase {ECO:0000313|EMBL:AJF61672.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
oxidative cyclase
rifcsplowo2_01_scaffold_6488_2
unknown

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1242..1670
DNA (429bp) protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_3
unknown

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1735..2280
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_4
unknown

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2487..2873
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_5
AR15, Woesearchaeaota, DPANN, Archaea

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3250..3807
DNA (558bp) protein (186aa)
id=5799864 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsplowo2_01_scaffold_6488_6

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3807..4556
DNA (750bp) protein (250aa)
hypothetical protein
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61196.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsplowo2_01_scaffold_6488_7

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4613..4834
DNA (222bp) protein (74aa)
Marine sediment metagenome DNA, contig: S01H1_L05957 {ECO:0000313|EMBL:GAF69253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5043668 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_6488_8
CG_Pacearch_03, Pacearchaeota, Archaea

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4821..5447
DNA (627bp) protein (209aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH id=5103755 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
peptidase M50 Tax=CG_Pacearch_03
Conserved hypothetical membrane protein, peptidase family M50
rifcsplowo2_01_scaffold_6488_9
unknown

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5457..5876
DNA (420bp) protein (140aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_10
unknown

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5972..6103
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_11
unknown

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comp(6391..7137)
DNA (747bp) protein (249aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_12

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comp(7529..9727)
DNA (2199bp) protein (733aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52160.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_6488_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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9899..11008
DNA (1110bp) protein (370aa)
transmembrane_regions 196..218 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
transmembrane_regions 196..218 id=13833 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
rifcsplowo2_01_scaffold_6488_14
RHI_OD1_Magasanikbacteria_41_16, Magasanikbacteria, Parcubacteria, Bacteria

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11368..12804
DNA (1437bp) protein (479aa)
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=RIFCSPHIGHO2_12_FULL_OD1_Magasanikbacteria_41_16_curated
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
rifcsplowo2_01_scaffold_6488_15

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12808..14016
DNA (1209bp) protein (403aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Cysteine desulfurase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUF0_KYRT2
SufS subfamily cysteine desulfurase
rifcsplowo2_01_scaffold_6488_16

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14016..14459
DNA (444bp) protein (148aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G6D8_CHLAD
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:KHO52917.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
NifU family SUF system FeS assembly protein
rifcsplowo2_01_scaffold_6488_17

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14479..15231
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ88_SINAD
FeS assembly ATPase SufC {ECO:0000313|EMBL:KHO52916.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
FeS assembly ATPase SufC
rifcsplowo2_01_scaffold_6488_18

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15218..15508
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52915.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Putative uncharacterized protein id=5800618 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative metal-sulfur cluster biosynthetic enzyme
rifcsplowo2_01_scaffold_6488_19
R_WWE3_42_11, WWE3, Bacteria

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15633..16397
DNA (765bp) protein (255aa)
Putative endonuclease/exonuclease/phosphatase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZX4_9GAMM id=43654 bin=ACD38 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
endonuclease/exonuclease/phosphatase Tax=RIFCSPLOWO2_01_FULL_WWE3_42_11_curated
Endonuclease; Exonuclease
rifcsplowo2_01_scaffold_6488_20
unknown

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comp(16403..17422)
DNA (1020bp) protein (340aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(17462..19987)
DNA (2526bp) protein (842aa)
magnesium-translocating P-type ATPase (EC:3.6.3.2); K01531 Mg2+-importing ATPase [EC:3.6.3.2] Tax=RBG_19FT_COMBO_JS1_35_14_curated
magnesium-translocating P-type ATPase id=14426023 bin=bin1_lowGC species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
magnesium transport P-type atpase
rifcsplowo2_01_scaffold_6488_22
unknown

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20125..20616
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_23
unknown

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comp(20803..21135)
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_24
unknown

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comp(21132..22004)
DNA (873bp) protein (291aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_25
unknown

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comp(22019..22402)
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_26
unknown

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comp(22404..22949)
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_27
unknown

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comp(22991..23530)
DNA (540bp) protein (180aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6488_28
unknown

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comp(23575..24069)
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying 28 items

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