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rifcsplowo2_01_scaffold_1055

Search features with annotation key words

Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1055_1
unknown

Not on your lists

176..547
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1055_2
unknown

Not on your lists

comp(755..1024)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1055_3
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(1050..2774)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B76B7
ABC transporter ATP-binding protein; K09686 antibiotic transport system permease protein Tax=CG_Woesearch_03
ABC-2 type transporter
rifcsplowo2_01_scaffold_1055_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(2831..3796)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E2996
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein Tax=CG_Woesearch_03
ABC-type multidrug transport system, ATP-ase compoment
rifcsplowo2_01_scaffold_1055_5

Not on your lists

4218..5144
DNA (927bp) protein (309aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Protein-export membrane protein SecF
rifcsplowo2_01_scaffold_1055_6

Not on your lists

5131..6723
DNA (1593bp) protein (531aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=5048449 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KHO45483.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_1055_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6776..7279)
DNA (504bp) protein (168aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_1055_8
GWA2_OD1_47_7, Parcubacteria, Bacteria

Not on your lists

comp(7276..7992)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AEED3
Cell division ATPase MinD, archaeal Tax=GWA2_OD1_47_7
cell division ATPase MinD
rifcsplowo2_01_scaffold_1055_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8126..8614)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D734E
hypothetical protein
Uncharacterized protein Tax=AR9
rifcsplowo2_01_scaffold_1055_10
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8656..9129)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003645100
hypothetical protein
Tax=AR9
rifcsplowo2_01_scaffold_1055_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9365..9676)
DNA (312bp) protein (104aa)
nac; nascent polypeptide-associated complex protein; K03626 nascent polypeptide-associated complex subunit alpha Tax=AR9
Nascent polypeptide-associated complex protein id=5800198 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nascent polypeptide-associated complex protein
rifcsplowo2_01_scaffold_1055_12
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10006..10692)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3TXT5_9ENTR
Methyltransferase type 11
Methyltransferase {ECO:0000313|EMBL:KKU88221.1}; TaxID=1618445 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_47_9.;"
rifcsplowo2_01_scaffold_1055_13
unknown

Not on your lists

10854..11090
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1055_14

Not on your lists

comp(11391..12083)
DNA (693bp) protein (231aa)
TraB family protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM id=5103107 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TraB family protein {ECO:0000313|EMBL:KHO50209.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
TraB family protein
rifcsplowo2_01_scaffold_1055_15

Not on your lists

12154..12429
DNA (276bp) protein (92aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50210.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Putative uncharacterized protein id=5041749 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_1055_16
unknown

Not on your lists

12452..12547
DNA (96bp) protein (32aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1055_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12635..12829
DNA (195bp) protein (65aa)
Tax=AR9
rifcsplowo2_01_scaffold_1055_18
unknown

Not on your lists

comp(12899..13375)
DNA (477bp) protein (159aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1055_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

13507..14487
DNA (981bp) protein (327aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=AR9
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rfc; replication factor C small subunit
rifcsplowo2_01_scaffold_1055_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14590..15492)
DNA (903bp) protein (301aa)
Tax=AR9
rifcsplowo2_01_scaffold_1055_21
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15549..16499)
DNA (951bp) protein (317aa)
id=5046358 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsplowo2_01_scaffold_1055_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

16586..16828
DNA (243bp) protein (81aa)
ferredoxin; K05337 ferredoxin id=5048736 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ferredoxin; K05337 ferredoxin
Tax=AR9
rifcsplowo2_01_scaffold_1055_23
unknown

Not on your lists

comp(16797..16964)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1055_24
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17053..17334)
DNA (282bp) protein (94aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
rifcsplowo2_01_scaffold_1055_25

Not on your lists


comp(17365..18039)
DNA (675bp) protein (225aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase id=5799901 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
fibrillarin
rifcsplowo2_01_scaffold_1055_26
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(18036..18989)
DNA (954bp) protein (318aa)
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; K14564 nucleolar protein 56 Tax=AR9
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_1055_27

Not on your lists


19661..20590
DNA (930bp) protein (310aa)
50S ribosomal protein L3 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT2_FERPA id=5103252 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
rifcsplowo2_01_scaffold_1055_28

Not on your lists


20592..21398
DNA (807bp) protein (269aa)
50S ribosomal protein L4P, large subunit ribosomal protein L4e {ECO:0000313|EMBL:KHO50223.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5042301 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L4
rifcsplowo2_01_scaffold_1055_29

Not on your lists


21416..21793
DNA (378bp) protein (126aa)
50S ribosomal protein L23P n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL23_THEKO
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rplW; 50S ribosomal protein L23
rifcsplowo2_01_scaffold_1055_30

Not on your lists


21821..22531
DNA (711bp) protein (237aa)
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L2P
Displaying items 1-30 of 190 in total

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