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rifcsplowo2_01_scaffold_28003

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_28003_1
CG_Woesearch_02, Woesearchaeota, Archaea

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107..727
DNA (621bp) protein (207aa)
hypothetical protein Tax=CG_Woesearch_02
Domain of unknown function SprT-like id=5800375 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_28003_2
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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968..1234
DNA (267bp) protein (89aa)
Archaeal histone A n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2G9_UNCMA
hmfA; histone A
Archaeal histone A {ECO:0000313|EMBL:CAJ37424.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (stra
rifcsplowo2_01_scaffold_28003_3

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1263..1661
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
rifcsplowo2_01_scaffold_28003_4
AR15, Woesearchaeaota, DPANN, Archaea

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1673..1837
DNA (165bp) protein (55aa)
id=5800377 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsplowo2_01_scaffold_28003_5

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1842..2237
DNA (396bp) protein (132aa)
transmembrane_regions 7..29 id=12905 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Uncharacterized protein {ECO:0000313|EMBL:EKE06774.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsplowo2_01_scaffold_28003_6
CG_Woesearch_03, Woesearchaeota, Archaea

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2314..3501
DNA (1188bp) protein (396aa)
membrane-associated metalloprotease Tax=CG_Woesearch_03
peptidase m50 id=5050972 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptidase M50
rifcsplowo2_01_scaffold_28003_7
unknown

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comp(3535..3981)
DNA (447bp) protein (149aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28003_8
R_WOR_2_68_15, WOR-2, Bacteria

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comp(3981..4907)
DNA (927bp) protein (309aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
Thioredoxin reductase n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZDR6_LEPFM
trxB; thioredoxin reductase
rifcsplowo2_01_scaffold_28003_9
unknown

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comp(4947..5765)
DNA (819bp) protein (273aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28003_10
AR1, Pacearchaeaota, DPANN, Archaea

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comp(6062..6754)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000346561B
hypothetical protein Tax=AR1
oxidoreductase FAD/NAD(P)-binding domain-containing protein
rifcsplowo2_01_scaffold_28003_11
unknown

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comp(6867..7136)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_28003_12
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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comp(7299..7445)
DNA (147bp) protein (49aa)
Methylated-DNA/protein-cysteine methyltransferase Tax=GWD2_OP11_45_10
Displaying 12 items

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