ggKbase home page

rifcsplowo2_01_scaffold_31232

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_31232_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(122..1168)
DNA (1047bp) protein (349aa)
ampS; putative leucyl aminopeptidase (EC:3.4.11.-) Tax=AR11
Putative uncharacterized protein PH1048 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58749_PYRHO
Leucyl aminopeptidase (aminopeptidase T)
rifcsplowo2_01_scaffold_31232_2
unknown

Not on your lists

comp(1320..1706)
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31232_3
unknown

Not on your lists

comp(1793..2320)
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31232_4

Not on your lists

comp(2323..3276)
DNA (954bp) protein (318aa)
Nucleolar protein I {ECO:0000313|EMBL:KHO49192.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
rifcsplowo2_01_scaffold_31232_5
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3725..4450
DNA (726bp) protein (242aa)
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
rifcsplowo2_01_scaffold_31232_6
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(4458..4592)
DNA (135bp) protein (45aa)
30S ribosomal protein S17e n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDJ9_PYRF1
30S ribosomal protein S17e; K02962 small subunit ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=694429 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;"
rifcsplowo2_01_scaffold_31232_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

4791..5189
DNA (399bp) protein (133aa)
id=5799756 Tax=CG_Woesearch_03
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_31232_8
unknown

Not on your lists

5215..5595
DNA (381bp) protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31232_9
unknown

Not on your lists

comp(5717..6394)
DNA (678bp) protein (226aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31232_10
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6467..7138)
DNA (672bp) protein (224aa)
UPF0758 protein MM_2791 n=2 Tax=Methanosarcina mazei RepID=Y2791_METMA
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:KKG87339.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
rifcsplowo2_01_scaffold_31232_11
unknown

Not on your lists

7191..8192
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3D7K2_9ACTO Tax=ACD80
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RQI0_9PLAN
rifcsplowo2_01_scaffold_31232_12
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8220..9416)
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5240748 bin=GW2011_AR10_complete species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S-adenosylmethionine synthetase (EC:2.5.1.6)
rifcsplowo2_01_scaffold_31232_13

Not on your lists

9548..10102
DNA (555bp) protein (185aa)
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO46373.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
putative transcription regulator, containing CBS protein
rifcsplowo2_01_scaffold_31232_14
unknown

Not on your lists

comp(10082..10309)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 14 items

View Taxonomy