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rifcsplowo2_01_scaffold_1958

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1958_1
CG_Omnitr_03, Omnitrophica, Bacteria

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123..851
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVF4_9BACT id=2627 bin=ACD11 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
zinc/iron permease Tax=CG_Omnitr_03
zinc/iron permease
rifcsplowo2_01_scaffold_1958_2
unknown

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889..1887
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003824DB2
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZH5_METFV Tax=AR20
putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein
rifcsplowo2_01_scaffold_1958_3

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comp(1852..3888)
DNA (2037bp) protein (679aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL79169.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_1958_4
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(3921..5087)
DNA (1167bp) protein (389aa)
AAA family ATPase, type II secretion system protein, containing DOD-type homing endonuclease n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A387_THEGJ
AAA family ATPase
AAA family ATPase, type II secretion system protein, containing DOD-type homing endonuclease {ECO:0000313|EMBL:ACS32699.1}; Flags: Precursor;; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci
rifcsplowo2_01_scaffold_1958_5
unknown

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comp(5089..5421)
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(5482..6024)
DNA (543bp) protein (181aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_1958_7
unknown

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comp(6031..6216)
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_8

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comp(6219..7145)
DNA (927bp) protein (309aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1958_9

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comp(7263..8462)
DNA (1200bp) protein (400aa)
aspC; Aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase id=1250446 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Aspartate aminotransferase {ECO:0000313|EMBL:EQB63309.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
rifcsplowo2_01_scaffold_1958_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(8511..8888)
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RS8E_ARCFU
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e Tax=AR11
ribosomal protein S8.e
rifcsplowo2_01_scaffold_1958_11
unknown

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comp(8949..9494)
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_12
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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9595..10314
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKR78656.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_1958_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10412..10636
DNA (225bp) protein (75aa)
snRNP Sm-like protein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Woesearchaeota_36_6_curated
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Like-Sm ribonucleoprotein core
rifcsplowo2_01_scaffold_1958_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10638..10826
DNA (189bp) protein (63aa)
50S ribosomal protein L37e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IND7_NITGG
rpl37e; 50S ribosomal protein L37e; K02922 large subunit ribosomal protein L37e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl37ae; 50S ribosomal protein L37e
rifcsplowo2_01_scaffold_1958_15
unknown

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10860..11927
DNA (1068bp) protein (356aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_16
unknown

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comp(11940..12095)
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_17

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comp(12298..13611)
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos18C8 RepID=Q64DH7_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82550.1}; TaxID=285411 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos18C8.;"
rifcsplowo2_01_scaffold_1958_18
AR6, Pacearchaeaota, DPANN, Archaea

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comp(13608..15950)
DNA (2343bp) protein (781aa)
SNF2-related protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NY66_9BACT
hypothetical protein Tax=AR6
SNF2 family helicase
rifcsplowo2_01_scaffold_1958_19

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comp(15953..17218)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos18C8 RepID=Q64DH7_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU82550.1}; TaxID=285411 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos18C8.;"
rifcsplowo2_01_scaffold_1958_20
unknown

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comp(17238..17738)
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_21
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(17752..24585)
DNA (6834bp) protein (2278aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Lytic murein transglycosylase Tax=CG_Pacearch_01
rifcsplowo2_01_scaffold_1958_22

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comp(24582..26528)
DNA (1947bp) protein (649aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_1958_23
Thermosphaera aggregans, Thermosphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(26542..27093)
DNA (552bp) protein (184aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=633148 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; T
Endonuclease NucS n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U028_THEAM
hypothetical protein
rifcsplowo2_01_scaffold_1958_24

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comp(27074..27217)
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK90814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsplowo2_01_scaffold_1958_25
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27328..28113
DNA (786bp) protein (262aa)
Molecular chaperone DnaJ n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SB65_9RHIZ
molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicr
rifcsplowo2_01_scaffold_1958_26
unknown

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28289..28450
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_27
unknown

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28593..29057
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1958_28
unknown

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comp(29064..30854)
DNA (1791bp) protein (597aa)
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IQX9_RAHAC id=5103740 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly
rifcsplowo2_01_scaffold_1958_29
AR17, Woesearchaeaota, DPANN, Archaea

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comp(30990..31133)
DNA (144bp) protein (48aa)
Tax=AR17
rifcsplowo2_01_scaffold_1958_30

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31184..31387
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54339.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Protein of unknown function DUF2283 id=5043685 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying 30 items

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