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rifcsplowo2_01_scaffold_5887

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5887_1
unknown

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2..151
DNA (150bp) protein (50aa)
Protein archease n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYA7_METFV id=5103007 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein archease n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYA7_METFV Tax=AR20
Protein archease
rifcsplowo2_01_scaffold_5887_2

Not on your lists

comp(138..1001)
DNA (864bp) protein (288aa)
Marine sediment metagenome DNA, contig: S12H4_S10495 {ECO:0000313|EMBL:GAI97007.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
id=5042256 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_5887_3
unknown

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1115..1501
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5887_4
unknown

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1520..1975
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5887_5
R_OP11_Gottesmanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1984..2445)
DNA (462bp) protein (154aa)
alias=gwe2_scaffold_360_25 Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_40_13_curated
alias=gwe2_scaffold_360_25 id=15190650 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rifcsplowo2_01_scaffold_5887_6
unknown

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comp(2438..2644)
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5887_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2641..3018)
DNA (378bp) protein (126aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_01_scaffold_5887_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3021..3224)
DNA (204bp) protein (68aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_01_scaffold_5887_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3261..5126)
DNA (1866bp) protein (622aa)
hypothetical protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037312EF
ATP dependent helicase
rifcsplowo2_01_scaffold_5887_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5227..5868
DNA (642bp) protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70496.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
rifcsplowo2_01_scaffold_5887_11

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5965..6192
DNA (228bp) protein (76aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S06361 {ECO:0000313|EMBL:GAG13804.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_5887_12

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6185..6490
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP2_9EURY id=5103474 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50258.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsplowo2_01_scaffold_5887_13
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

6549..8594
DNA (2046bp) protein (682aa)
small GTP-binding protein; K06883 id=5045267 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
small GTP-binding protein; K06883 Tax=AR18
Small GTP-binding protein
rifcsplowo2_01_scaffold_5887_14
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

8594..8974
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037786E8
hypothetical protein
seg Tax=AR15
rifcsplowo2_01_scaffold_5887_15

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8975..9397
DNA (423bp) protein (141aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
Zn-ribbon containing protein {ECO:0000313|EMBL:AJF62293.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_5887_16
unknown

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9429..9737
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5887_17

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9805..11802
DNA (1998bp) protein (666aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97902.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Surface layer protein B SlgB-2
rifcsplowo2_01_scaffold_5887_18

Not on your lists

11841..12401
DNA (561bp) protein (187aa)
id=5045767 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54434.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_5887_19
unknown

Not on your lists

12398..12838
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5887_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

12835..13530
DNA (696bp) protein (232aa)
hypothetical protein
seg Tax=RBG_13_Woesearchaeota_36_6_curated
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_5887_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13689..13919
DNA (231bp) protein (77aa)
Transcription regulator, copG/nikR family n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A3Q2_THEGJ
copG/nikR family transcriptional regulator
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_5887_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13925..14332)
DNA (408bp) protein (136aa)
id=5049666 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_5887_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(14577..14807)
DNA (231bp) protein (77aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVT8_9BACT id=5103600 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07339 hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
rifcsplowo2_01_scaffold_5887_24

Not on your lists

comp(14811..15020)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037669E6
Marine sediment metagenome DNA, contig: S12H4_L00628 {ECO:0000313|EMBL:GAI78303.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_5887_25
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15265..15948)
DNA (684bp) protein (228aa)
sepiapterin reductase (EC:1.1.1.325)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI000347F76C
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:KKU94042.1}; TaxID=1618661 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
rifcsplowo2_01_scaffold_5887_26
unknown

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comp(15945..16256)
DNA (312bp) protein (104aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5887_27
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(16258..16764)
DNA (507bp) protein (169aa)
hypothetical protein Tax=GWA2_OD1_31_28_partial
seg id=5043708 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_5887_28
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(16761..18395)
DNA (1635bp) protein (545aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=391623 species="Archaea; Eury
Threonine--tRNA ligase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJK1_THEBM
threonyl-tRNA synthetase
Displaying 28 items

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