ggKbase home page

rifcsplowo2_01_scaffold_20633_9

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_29_14

near complete RP 37 / 55 MC: 7 BSCG 6 / 51 ASCG 33 / 38 MC: 5
Location: comp(5359..6165)

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DGP2_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 250.0
  • Bit_score: 235
  • Evalue 6.30e-59
pyridoxal-5'-phosphate-dependent enzyme subunit beta similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 250.0
  • Bit_score: 235
  • Evalue 1.80e-59
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ABN53121.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 250.0
  • Bit_score: 235
  • Evalue 8.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 807
ATGAAAAAGAGAGTTGGAAAAACAAGATTAATAAAAACTAAATTATTTGGATATAATTTATATATTAAAGATGAAAGTAGGAATCCCTTTGGAACATATAAAGATAGAAGAAGCGAGTTAATTATTAAAAAGGCAAGAAAAAATAAAATAAAAAAATTGGTAATTATTTCTTCTGGAAATGCTTGTTATAGTTTAGCTAGATTTACTAAAGGATCAAAAATTCAGTTGGTTTGCATTGTTGATATAAAAATAAAGAAAAAGATAAAAAATATCATAAAGAAGTATAGTCATAAAATACTGGAAGTAGACTTAAACAAAAAAATTTTATCACAAAAAGAGATCATAAATTTAGCTAGAGAAAGAAGAGATGAAAGAATACTAAACGTTTCTACTGGATTTCATCAAACTGGTATGGATATCATTAAAGAATTAAAAAATGAAAAACCAGATTATGTAATAGTTCCAATAGGAAGCGGTGAAACATTTGTTGGATTATATTATGGAATAAAAAAATATGGATTAAAAACCATACTTATTGGCGTAGGGGTAAAAAATAAGATAAAAAGCTTTGCAGATAAATTACATACAATACATACCCCTTATCAAAATGAGATAAAGAAGATTGTAAAAAAAGGAAACAAGTTAATTCTGCTAAATGAAAAAGAGGTTAGAGAAGCTTATGATAAATTTAAAAAAATGGTTAAATGTGAACCTTCCAGTGCAGTTGTTTTGGGAGCATTTAAGAAGATAAAATTTAAAAAAGAGGATAAAATTATTGTTATTAATTCTGGAAAGGGAGTAATATAG
PROTEIN sequence
Length: 269
MKKRVGKTRLIKTKLFGYNLYIKDESRNPFGTYKDRRSELIIKKARKNKIKKLVIISSGNACYSLARFTKGSKIQLVCIVDIKIKKKIKNIIKKYSHKILEVDLNKKILSQKEIINLARERRDERILNVSTGFHQTGMDIIKELKNEKPDYVIVPIGSGETFVGLYYGIKKYGLKTILIGVGVKNKIKSFADKLHTIHTPYQNEIKKIVKKGNKLILLNEKEVREAYDKFKKMVKCEPSSAVVLGAFKKIKFKKEDKIIVINSGKGVI*