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rifcsplowo2_01_scaffold_20633

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20633_1
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3..1442)
DNA (1440bp) protein (480aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=AR5
valyl tRNA-synthetase (EC:6.1.1.9)
Valyl-tRNA synthetase id=3688780 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_20633_2
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1464..2441)
DNA (978bp) protein (326aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMR74408.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_20633_3
unknown

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2560..2994
DNA (435bp) protein (145aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20633_4
GWB1_OD1_52_6, Kaiserbacteria, Parcubacteria, Bacteria

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3083..3928
DNA (846bp) protein (282aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKW26336.1}; TaxID=1618674 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWB1_52_6.;"
id=5103762 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_20633_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(3944..4210)
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_33_26_curated
Putative uncharacterized protein id=5048508 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_20633_6
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

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comp(4203..4418)
DNA (216bp) protein (72aa)
Tax=Altiarchaeum hamiconexum
rifcsplowo2_01_scaffold_20633_7
unknown

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comp(4411..4653)
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20633_8
unknown

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4726..5217
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20633_9
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5359..6165)
DNA (807bp) protein (269aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DGP2_CLOTH
pyridoxal-5'-phosphate-dependent enzyme subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ABN53121.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source
rifcsplowo2_01_scaffold_20633_10
AR18, Woesearchaeaota, DPANN, Archaea

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6275..6793
DNA (519bp) protein (173aa)
hypothetical protein
id=5044957 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_20633_11

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6824..7858
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6V261_9EURY
Marine sediment metagenome DNA, contig: S01H1_L00004 {ECO:0000313|EMBL:GAF76789.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsplowo2_01_scaffold_20633_12
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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7855..9087
DNA (1233bp) protein (411aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Micrarchaeota_49_10_curated
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Methanobacterium sp. MB1 RepID=U6EE66_9EURY
rifcsplowo2_01_scaffold_20633_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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9084..9974
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E6Q4_9BACT
hypothetical protein
Uncharacterized protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_20633_14
CG_Woesearch_02, Woesearchaeota, Archaea

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10035..10454
DNA (420bp) protein (140aa)
hypothetical protein Tax=CG_Woesearch_02
Fibronectin-binding protein id=5800653 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
fibronectin-binding a domain-containing protein
Displaying 14 items

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