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rifcsplowo2_01_scaffold_6445

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6445_1
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(2..265)
DNA (264bp) protein (88aa)
DNA methylase N-4/N-6 domain-containing protein Tax=CG_Pacearch_06
DNA methylase id=5800067 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA methylase N-4/N-6 domain-containing protein
rifcsplowo2_01_scaffold_6445_2
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(258..557)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI000365B13E
DNA methylase N-4/N-6 domain-containing protein Tax=CG_Pacearch_06
DNA modification methylase
rifcsplowo2_01_scaffold_6445_3
unknown

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comp(760..1275)
DNA (516bp) protein (172aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6445_4
AR11, Woesearchaeaota, DPANN, Archaea

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1488..2300
DNA (813bp) protein (271aa)
DNA polymerase beta domain protein region (Fragment) Tax=AR11
DNA polymerase beta domain protein region (Fragment) id=5800819 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase beta protein
rifcsplowo2_01_scaffold_6445_5
unknown

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comp(2525..2701)
DNA (177bp) protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6445_6
unknown

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comp(2703..2861)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6445_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(2955..3350)
DNA (396bp) protein (132aa)
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=RBG_13_Woesearchaeota_36_6_curated
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S6
rifcsplowo2_01_scaffold_6445_8

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3529..6732
DNA (3204bp) protein (1068aa)
DNA gyrase subunit B {ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|RuleBase:RU003363};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
DNA gyrase subunit B n=1 Tax=uncultured bacterium RepID=K1Z9K4_9BACT
DNA gyrase subunit B
rifcsplowo2_01_scaffold_6445_9
unknown

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6740..7072
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6445_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(7073..8041)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I5H4_9BACL
disulfide bond oxidoreductase D family protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
rifcsplowo2_01_scaffold_6445_11
unknown

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comp(7998..8159)
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6445_12

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comp(8531..9130)
DNA (600bp) protein (200aa)
Ribosomal protein S7P (RP-S7, rpsG) {ECO:0000313|EMBL:AIF00798.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
rifcsplowo2_01_scaffold_6445_13

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comp(9133..9570)
DNA (438bp) protein (146aa)
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/I
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsplowo2_01_scaffold_6445_14
AR4, Woesearchaeaota, DPANN, Archaea

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comp(9575..9988)
DNA (414bp) protein (138aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5043967 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_6445_15

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comp(9993..10265)
DNA (273bp) protein (91aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000313|EMBL:AJF63053.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_6445_16

Not on your lists

comp(10267..11418)
DNA (1152bp) protein (384aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO53420.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
rifcsplowo2_01_scaffold_6445_17

Not on your lists

comp(11424..14129)
DNA (2706bp) protein (902aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_6445_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14211..16013)
DNA (1803bp) protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_6445_19

Not on your lists

comp(16093..17577)
DNA (1485bp) protein (495aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:KHO46962.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO46962.1};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_6445_20

Not on your lists

comp(17675..17935)
DNA (261bp) protein (87aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
DNA-directed RNA polymerase, subunit H
Displaying 20 items

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