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rifcsplowo2_01_scaffold_11961

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11961_1
unknown

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1..222
DNA (222bp) protein (74aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_2

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comp(830..3445)
DNA (2616bp) protein (872aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5048518 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1579365 species="Archaea.;" sourc
Leucine-tRNA ligase
rifcsplowo2_01_scaffold_11961_3
unknown

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3687..4088
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_4
AR5, Aenigmarchaeota, DPANN, Archaea

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4268..4654
DNA (387bp) protein (129aa)
alias=gwa2_scaffold_521_40 id=18248230 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_40 Tax=AR5
rifcsplowo2_01_scaffold_11961_5
unknown

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4710..5177
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(5231..5449)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DF465
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
MarR family transcriptional regulator
rifcsplowo2_01_scaffold_11961_7
unknown

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comp(5457..5681)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_8
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(5717..6154)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
Putative uncharacterized protein id=3309828 bin=GWA1_ZB2_49_26 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
rifcsplowo2_01_scaffold_11961_9
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6525..7262
DNA (738bp) protein (246aa)
Uncharacterized protein n=4 Tax=Xanthomonas RepID=H1XFI8_9XANT rbh
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KGK67093.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv
rifcsplowo2_01_scaffold_11961_10
CG_Woesearch_02, Woesearchaeota, Archaea

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7430..8203
DNA (774bp) protein (258aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=CG_Woesearch_02
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5046750 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_11961_11
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8258..8884
DNA (627bp) protein (209aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; TaxID=632292 species="Bacteria; Firmicut
Purine nucleoside phosphorylase n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q7Q3_CALH1
methylthioadenosine phosphorylase
rifcsplowo2_01_scaffold_11961_12
unknown

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8884..9072
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_13
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(9073..10698)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467S0_METBF
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsplowo2_01_scaffold_11961_14
unknown

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comp(10764..11291)
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(11291..13048)
DNA (1758bp) protein (586aa)
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 Tax=RBG_13_Woesearchaeota_36_6_curated
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 id=5047426 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATPase RIL
rifcsplowo2_01_scaffold_11961_16
unknown

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comp(13360..13899)
DNA (540bp) protein (180aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_17
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13984..14211)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AX4_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB55465.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina b
rifcsplowo2_01_scaffold_11961_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14305..15174
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369D442
transposase IS4 family protein Tax=CG_Woesearch_02
transposase IS4 family protein
rifcsplowo2_01_scaffold_11961_19
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

15201..15611
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT95129.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
hypothetical protein id=5045794 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_11961_20
unknown

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15968..16219
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_21
unknown

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16228..16698
DNA (471bp) protein (157aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

16735..17154
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=4845852 bin=PER_GWC2_41_7 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
protein of unknown function DUF101 Tax=AR5
Protein archease
rifcsplowo2_01_scaffold_11961_23

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17154..18617
DNA (1464bp) protein (488aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5048716 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
protein of unknown function UPF0027
rifcsplowo2_01_scaffold_11961_24
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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18655..19503
DNA (849bp) protein (283aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTE7_METMJ
membrane-bound metal-dependent hydrolase
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ABN56647.1}; Flags: Precursor;; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Metha
rifcsplowo2_01_scaffold_11961_25

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comp(19642..20043)
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
rifcsplowo2_01_scaffold_11961_26
unknown

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comp(20130..20519)
DNA (390bp) protein (130aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11961_27
unknown

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comp(20516..20803)
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 27 items

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