ggKbase home page

rifcsplowo2_01_scaffold_20097

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20097_1
unknown

Not on your lists

79..288
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20097_2

Not on your lists

comp(633..941)
DNA (309bp) protein (103aa)
transcription termination factor Tfs (EC:2.7.7.6)
Marine sediment metagenome DNA, contig: S01H1_S38339 {ECO:0000313|EMBL:GAG48814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_20097_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(944..1558)
DNA (615bp) protein (205aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=CG_Woesearch_02
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_20097_4

Not on your lists

1606..2052
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51032.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_20097_5

Not on your lists

comp(2056..3195)
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO47045.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein; K09150 hypothetical protein id=5043729 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Hypothetical protein
rifcsplowo2_01_scaffold_20097_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3192..3824)
DNA (633bp) protein (211aa)
Putative membrane-associated protein/domain protein id=5799953 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative membrane-associated protein/domain protein Tax=AR15
membrane protein
rifcsplowo2_01_scaffold_20097_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4047..5096
DNA (1050bp) protein (350aa)
hypothetical protein Tax=CG_Woesearch_01
Flagellar hook-length control domain containing protein id=4021489 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
rifcsplowo2_01_scaffold_20097_8
unknown

Not on your lists

5098..5319
DNA (222bp) protein (74aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20097_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

5417..6457
DNA (1041bp) protein (347aa)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA 3'-terminal phosphate cyclase Tax=AR15
RNA 3'-terminal-phosphate cyclase
rifcsplowo2_01_scaffold_20097_10
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(6435..8834)
DNA (2400bp) protein (800aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2DGN0_TRIVA
Frigida-LIKE protein {ECO:0000313|EMBL:KEH39249.1}; Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH39249}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
hypothetical protein
rifcsplowo2_01_scaffold_20097_11
unknown

Not on your lists

9120..9200
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 11 items

View Taxonomy