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rifcsplowo2_01_scaffold_13190

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13190_1

Not on your lists

comp(25..573)
DNA (549bp) protein (183aa)
hypothetical protein
transmembrane_regions id=5042246 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46744.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_13190_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(582..1241)
DNA (660bp) protein (220aa)
Tax=AR11
rifcsplowo2_01_scaffold_13190_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1234..1854)
DNA (621bp) protein (207aa)
seg id=5043751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsplowo2_01_scaffold_13190_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(1861..2421)
DNA (561bp) protein (187aa)
hypothetical protein
seg Tax=CG_Woesearch_01
transmembrane_regions id=5042248 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_13190_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3195..3767
DNA (573bp) protein (191aa)
translin, putative Tax=CG_Woesearch_02
hypothetical protein id=5047338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
translin
rifcsplowo2_01_scaffold_13190_6
unknown

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3773..3997
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13190_7
unknown

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4145..4459
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13190_8
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

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4484..6265
DNA (1782bp) protein (594aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
Aspartate--tRNA ligase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QW64_CHLT3
aspS; aspartyl-tRNA synthetase
rifcsplowo2_01_scaffold_13190_9
GWA2_OD1_38_27, Parcubacteria, Bacteria

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6270..6722
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003752BB3
Histidine triad domain protein {ECO:0000313|EMBL:KKQ65630.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
histidine triad domain protein
rifcsplowo2_01_scaffold_13190_10
Pseudoalteromonas marina, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6965..7840
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20480 RepID=G7FW93_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG24592.1}; TaxID=1117316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
metal-dependent protein hydrolase
rifcsplowo2_01_scaffold_13190_11

Not on your lists

7879..8163
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_13190_12

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8160..9572
DNA (1413bp) protein (471aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO55627.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO55627.1};; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_13190_13

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9562..10935
DNA (1374bp) protein (458aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5044939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B (EC:6.3.5.6)
rifcsplowo2_01_scaffold_13190_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(10924..12093)
DNA (1170bp) protein (390aa)
metallophosphoesterase Tax=RBG_13_Woesearchaeota_36_6_curated
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsplowo2_01_scaffold_13190_15
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12120..13613)
DNA (1494bp) protein (498aa)
Putative ATPase id=5799867 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative ATPase Tax=AR15
ATPase
rifcsplowo2_01_scaffold_13190_16
unknown

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13667..13837
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13190_17
R_WOR_2_52_10, WOR-2, Bacteria

Not on your lists

14074..14310
DNA (237bp) protein (79aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_2_52_10_curated
Putative uncharacterized protein id=4208809 bin=GWA2_OP3_53_43 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
rifcsplowo2_01_scaffold_13190_18
unknown

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comp(14405..15052)
DNA (648bp) protein (216aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13190_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15049..15423)
DNA (375bp) protein (125aa)
Uncharacterized protein MJ0653 n=2 Tax=Methanocaldococcus RepID=Y653_METJA id=5103199 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_13190_20
unknown

Not on your lists

comp(15438..16199)
DNA (762bp) protein (254aa)

This feature has no annotations

Displaying 20 items

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