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rifcsplowo2_01_scaffold_8396

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8396_1
unknown

Not on your lists

comp(230..499)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_2
unknown

Not on your lists

583..1152
DNA (570bp) protein (190aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_3
unknown

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1208..1606
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1643..2653)
DNA (1011bp) protein (337aa)
Putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Clostridium botulinum Bf RepID=B1QG45_CLOBO
Periplasmic binding domain protein {ECO:0000313|EMBL:EXY87423.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragili
putative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein
rifcsplowo2_01_scaffold_8396_5

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comp(2654..3802)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037D50AB
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:KHO50625.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
extracellular ligand-binding receptor
rifcsplowo2_01_scaffold_8396_6
unknown

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comp(3799..4206)
DNA (408bp) protein (136aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_7
CG_Woesearch_01, Woesearchaeota, Archaea

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4293..5768
DNA (1476bp) protein (492aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14) Tax=CG_Woesearch_01
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=5240553 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_8396_8

Not on your lists

5778..6065
DNA (288bp) protein (96aa)
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
replication factor A1
rifcsplowo2_01_scaffold_8396_9
unknown

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6065..6334
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_10
unknown

Not on your lists

comp(6752..7384)
DNA (633bp) protein (211aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_11
unknown

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comp(7554..8438)
DNA (885bp) protein (295aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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8748..8948
DNA (201bp) protein (67aa)
MarR family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_8396_13
unknown

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comp(9004..9543)
DNA (540bp) protein (180aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_14
unknown

Not on your lists

comp(9568..10431)
DNA (864bp) protein (288aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_15
unknown

Not on your lists

10541..11143
DNA (603bp) protein (201aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8396_16
CG_Pacearch_05, Pacearchaeota, Archaea

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11140..11502
DNA (363bp) protein (121aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_8396_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(11797..13995)
DNA (2199bp) protein (733aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_8396_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(13992..15221)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein id=5048512 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying 18 items

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